RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 CCDC88CQ9P219 2028 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-205ENST00000493587 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.25□□□□□ -1.41
VPS13B-205ENST00000493587 NPC1O15118 1278 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 XRCC3O43542 346 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 CD74P04233 296 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 H1F0P07305 194 aaKnown RBP6.25□□□□□ -1.41
VPS13B-205ENST00000493587 CSF1P09603 554 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 PIRTP0C851 137 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 ATF1P18846 271 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 WNT3AP56704 352 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 CLDN12P56749 244 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 CBFBQ13951 182 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 HAGHQ16775 308 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF750Q32MQ0 723 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 HENMT1Q5T8I9 393 aaKnown RBP6.25□□□□□ -1.41
VPS13B-205ENST00000493587 OGFOD3Q6PK18 319 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 CD200R1LQ6Q8B3 271 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 NUFIP2Q7Z417 695 aaKnown RBP6.25□□□□□ -1.41
VPS13B-205ENST00000493587 LHFPL4Q7Z7J7 247 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 NRSN1Q8IZ57 195 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 OR10H4Q8NGA5 316 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 SMIM12Q96EX1 92 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 PIK3IP1Q96FE7 263 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 NPY6RQ99463 290 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 ZDHHC6Q9H6R6 413 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 GOLGA2P5Q9HBQ8 144 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 TRIM36Q9NQ86 728 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 TMED3Q9Y3Q3 217 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 TMEM269A0A1B0GVZ9 245 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 RNF222A6NCQ9 220 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 VSTM2BA6NLU5 285 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 SLC38A8A6NNN8 435 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 AHRRA9YTQ3 701 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 NME2P1O60361 137 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 OPN1MWP04001 364 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 OR8U9P0C7N5 309 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 OPN1MW2P0DN77 364 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 OPN1MW3P0DN78 364 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 LMO2P25791 158 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 LPAR6P43657 344 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 HSD11B2P80365 405 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 EBPQ15125 230 aaKnown RBP6.25□□□□□ -1.41
VPS13B-205ENST00000493587 SLC24A5Q71RS6 500 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 GPRIN1Q7Z2K8 1008 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 KMT5CQ86Y97 462 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 LYG1Q8N1E2 194 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 BBS1Q8NFJ9 593 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 ECHDC3Q96DC8 303 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 FAM46AQ96IP4 442 aaKnown RBP6.25□□□□□ -1.41
VPS13B-205ENST00000493587 SHDQ96IW2 340 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 SGPP1Q9BX95 441 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 CHST6Q9GZX3 395 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 LMAN1LQ9HAT1 526 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 TM7SF3Q9NS93 570 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 ABRACLQ9P1F3 81 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 USP36Q9P275 1121 aaKnown RBP6.25□□□□□ -1.41
VPS13B-205ENST00000493587 CACNG4Q9UBN1 327 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 KCNE5Q9UJ90 142 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 FBXO4Q9UKT5 387 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 PPIAL4AQ9Y536 164 aa6.25□□□□□ -1.41
VPS13B-205ENST00000493587 TRBV5-3A0A0A0MS03 114 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 TMEM272A0A1B0GTI8 110 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 C17orf102A2RUQ5 167 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 K7ERU9 68 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 MANBAO00462 879 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 AMBPP02760 352 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 LCATP04180 440 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 OR12D1P0DN82 309 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 ZNF7P17097 686 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-205ENST00000493587 FDXRP22570 491 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 TACR1P25103 407 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 GDF5P43026 501 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 CAPZBP47756 277 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 OR12D2P58182 307 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 IL2P60568 153 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 SCARB2Q14108 478 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 PAFAH1B3Q15102 231 aaKnown RBP6.24□□□□□ -1.41
VPS13B-205ENST00000493587 RNF219Q5W0B1 726 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-205ENST00000493587 LHX8Q68G74 356 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 PRR27Q6MZM9 219 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 VWA1Q6PCB0 445 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 CXCL17Q6UXB2 119 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 FCRLAQ7L513 359 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 MCEMP1Q8IX19 187 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 ARIH2OSQ8N7S6 290 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 OR4C15Q8NGM1 316 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 OR1J2Q8NGS2 313 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 TFGQ92734 400 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-205ENST00000493587 BCL2L2Q92843 193 aaPredicted RBP6.24□□□□□ -1.41
VPS13B-205ENST00000493587 TMEM18Q96B42 140 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 C16orf58Q96GQ5 468 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 PRRX2Q99811 253 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 TRMT61BQ9BVS5 477 aaKnown RBP6.24□□□□□ -1.41
VPS13B-205ENST00000493587 TTTY10Q9BZA0 68 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 TBL1XR1Q9BZK7 514 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 OR11A1Q9GZK7 315 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 POFUT1Q9H488 388 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 APMAPQ9HDC9 416 aa6.24□□□□□ -1.41
VPS13B-205ENST00000493587 CSAG2Q9Y5P2 127 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms