RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 SH3GL3Q99963 347 aa10.1□□□□□ -0.79
CTSA-209ENST00000493522 NOX3Q9HBY0 568 aa10.1□□□□□ -0.79
CTSA-209ENST00000493522 RPRD1BQ9NQG5 326 aaKnown RBP10.1□□□□□ -0.79
CTSA-209ENST00000493522 VSX1Q9NZR4 365 aaPredicted RBP10.1□□□□□ -0.79
CTSA-209ENST00000493522 REV1Q9UBZ9 1251 aa10.1□□□□□ -0.79
CTSA-209ENST00000493522 RNF115Q9Y4L5 304 aa10.1□□□□□ -0.79
CTSA-209ENST00000493522 DPRXA6NFQ7 191 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 RIIAD1A6NNX1 92 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 ABCD4O14678 606 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 SLC16A7O60669 478 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 KHDRBS3O75525 346 aaKnown RBP10.09□□□□□ -0.79
CTSA-209ENST00000493522 RAB36O95755 333 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 IFNGP01579 166 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 ZNF3P17036 446 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 IGFBP5P24593 272 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 LOXP28300 417 aaPredicted RBP10.09□□□□□ -0.79
CTSA-209ENST00000493522 GRK5P34947 590 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 GUCA1AP43080 201 aaPredicted RBP10.09□□□□□ -0.79
CTSA-209ENST00000493522 PTDSS1P48651 473 aaKnown RBP10.09□□□□□ -0.79
CTSA-209ENST00000493522 DAPP51397 102 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 MRPS34P82930 218 aaKnown RBP10.09□□□□□ -0.79
CTSA-209ENST00000493522 PIGFQ07326 219 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 SPOCK1Q08629 439 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 SLC36A2Q495M3 483 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 Q5PR19 223 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 SLC27A4Q6P1M0 643 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 TMEM53Q6P2H8 277 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 ZNF704Q6ZNC4 412 aaPredicted RBP10.09□□□□□ -0.79
CTSA-209ENST00000493522 SLC16A14Q7RTX9 510 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 LRRC75A-AS1Q8N1F1 130 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 PQLC1Q8N2U9 271 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 LNX2Q8N448 690 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 CYB561A3Q8NBI2 242 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 KBTBD8Q8NFY9 601 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 COX4I2Q96KJ9 171 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 SLC38A2Q96QD8 506 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 SNX18Q96RF0 628 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 KCNS3Q9BQ31 491 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 NUAK2Q9H093 628 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 KCNN2Q9H2S1 579 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 RNF121Q9H920 327 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 UBTD1Q9HAC8 227 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 MOV10Q9HCE1 1003 aaKnown RBP10.09□□□□□ -0.79
CTSA-209ENST00000493522 ZNF224Q9NZL3 707 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 KLHL21Q9UJP4 597 aa10.09□□□□□ -0.79
CTSA-209ENST00000493522 IGHV1-18A0A0C4DH31 117 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 A0A1W2PPR1 153 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 SMPD2O60906 423 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 MITFO75030 526 aaPredicted RBP10.08□□□□□ -0.8
CTSA-209ENST00000493522 BAG2O95816 211 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 PLAUP00749 431 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 CELA3BP08861 270 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 CECR9P0C854 216 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 PATE4P0C8F1 98 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 CBR1P16152 277 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 NPR2P20594 1047 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 MSR1P21757 451 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 PAX7P23759 505 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 PTAFRP25105 342 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 CD40P25942 277 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 CRABP1P29762 137 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 ARR3P36575 388 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 GIPRP48546 466 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 CRMP1Q14194 572 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 GINS1Q14691 196 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 ETFDHQ16134 617 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 NRN1LQ496H8 165 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.08□□□□□ -0.8
CTSA-209ENST00000493522 PARP8Q8N3A8 854 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 SLC37A3Q8NCC5 494 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 OR9Q1Q8NGQ5 310 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 PIGTQ969N2 578 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 NABP1Q96AH0 204 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 TSSK2Q96PF2 358 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 SIAEQ9HAT2 523 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 EMC7Q9NPA0 242 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 CCNB1IP1Q9NPC3 277 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 ENOPH1Q9UHY7 261 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 POU2F3Q9UKI9 436 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 COA3Q9Y2R0 106 aaPredicted RBP10.08□□□□□ -0.8
CTSA-209ENST00000493522 POLR1DQ9Y2S0 133 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 TLN2Q9Y4G6 2542 aa10.08□□□□□ -0.8
CTSA-209ENST00000493522 OR6C68A6NDL8 312 aa10.07□□□□□ -0.8
CTSA-209ENST00000493522 ATP6V1G2-DDX39BF2Z307 99 aa10.07□□□□□ -0.8
CTSA-209ENST00000493522 DCTN6O00399 190 aa10.07□□□□□ -0.8
CTSA-209ENST00000493522 EI24O14681 340 aa10.07□□□□□ -0.8
CTSA-209ENST00000493522 LY6G6DO95868 133 aa10.07□□□□□ -0.8
CTSA-209ENST00000493522 IGKV3-15P01624 115 aa10.07□□□□□ -0.8
CTSA-209ENST00000493522 LAP3P28838 519 aa10.07□□□□□ -0.8
CTSA-209ENST00000493522 CRISP1P54107 249 aa10.07□□□□□ -0.8
CTSA-209ENST00000493522 CDH11P55287 796 aa10.07□□□□□ -0.8
CTSA-209ENST00000493522 RAB1AP62820 205 aa10.07□□□□□ -0.8
CTSA-209ENST00000493522 HSF2Q03933 536 aa10.07□□□□□ -0.8
CTSA-209ENST00000493522 DBPQ10586 325 aaPredicted RBP10.07□□□□□ -0.8
CTSA-209ENST00000493522 RCN1Q15293 331 aa10.07□□□□□ -0.8
CTSA-209ENST00000493522 OTPQ5XKR4 325 aa10.07□□□□□ -0.8
CTSA-209ENST00000493522 KDM4DQ6B0I6 523 aa10.07□□□□□ -0.8
CTSA-209ENST00000493522 SLC22A25Q6T423 547 aa10.07□□□□□ -0.8
CTSA-209ENST00000493522 FOXL2NBQ6ZUU3 175 aa10.07□□□□□ -0.8
CTSA-209ENST00000493522 DPPA2Q7Z7J5 298 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms