RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 SH3BGRP55822 239 aaPredicted RBP15.07■□□□□ 0
LIME1-208ENST00000493265 SNRPGP62308 76 aaKnown RBP15.07■□□□□ 0
LIME1-208ENST00000493265 TUBA1BP68363 451 aa15.07■□□□□ 0
LIME1-208ENST00000493265 TUBA4AP68366 448 aa15.07■□□□□ 0
LIME1-208ENST00000493265 GABRA6Q16445 453 aa15.07■□□□□ 0
LIME1-208ENST00000493265 ANKRD16Q6P6B7 361 aa15.07■□□□□ 0
LIME1-208ENST00000493265 TUBA1AQ71U36 451 aa15.07■□□□□ 0
LIME1-208ENST00000493265 SLC22A24Q8N4F4 322 aa15.07■□□□□ 0
LIME1-208ENST00000493265 ZNF511Q8NB15 262 aa15.07■□□□□ 0
LIME1-208ENST00000493265 CNIH3Q8TBE1 160 aa15.07■□□□□ 0
LIME1-208ENST00000493265 TRUB1Q8WWH5 349 aaKnown RBP15.07■□□□□ 0
LIME1-208ENST00000493265 S100PBPQ96BU1 408 aa15.07■□□□□ 0
LIME1-208ENST00000493265 CNBD2Q96M20 576 aa15.07■□□□□ 0
LIME1-208ENST00000493265 ZNF582Q96NG8 517 aaPredicted RBP15.07■□□□□ 0
LIME1-208ENST00000493265 RACGAP1Q9H0H5 632 aa15.07■□□□□ 0
LIME1-208ENST00000493265 CLN6Q9NWW5 311 aa15.07■□□□□ 0
LIME1-208ENST00000493265 MPZL2O60487 215 aa15.06■□□□□ 0
LIME1-208ENST00000493265 GLCEO94923 617 aa15.06■□□□□ 0
LIME1-208ENST00000493265 PSMB1P20618 241 aaKnown RBP15.06■□□□□ 0
LIME1-208ENST00000493265 HOXC12P31275 282 aa15.06■□□□□ 0
LIME1-208ENST00000493265 FMO3P31513 532 aa15.06■□□□□ 0
LIME1-208ENST00000493265 NUDT6P53370 316 aa15.06■□□□□ 0
LIME1-208ENST00000493265 CDH11P55287 796 aa15.06■□□□□ 0
LIME1-208ENST00000493265 GLO1Q04760 184 aa15.06■□□□□ 0
LIME1-208ENST00000493265 IL18R1Q13478 541 aa15.06■□□□□ 0
LIME1-208ENST00000493265 MAD2L1BPQ15013 274 aaPredicted RBP15.06■□□□□ 0
LIME1-208ENST00000493265 TBRG1Q3YBR2 411 aa15.06■□□□□ 0
LIME1-208ENST00000493265 AADACL4Q5VUY2 407 aa15.06■□□□□ 0
LIME1-208ENST00000493265 NXNL2Q5VZ03 156 aa15.06■□□□□ 0
LIME1-208ENST00000493265 UGT2A3Q6UWM9 527 aa15.06■□□□□ 0
LIME1-208ENST00000493265 MEPCEQ7L2J0 689 aaKnown RBP15.06■□□□□ 0
LIME1-208ENST00000493265 OR10H5Q8NGA6 315 aa15.06■□□□□ 0
LIME1-208ENST00000493265 OR52N5Q8NH56 324 aa15.06■□□□□ 0
LIME1-208ENST00000493265 RHOXF1Q8NHV9 184 aa15.06■□□□□ 0
LIME1-208ENST00000493265 C11orf40Q8WZ69 217 aa15.06■□□□□ 0
LIME1-208ENST00000493265 BCL2L2Q92843 193 aaPredicted RBP15.06■□□□□ 0
LIME1-208ENST00000493265 HDHD5Q9BXW7 423 aa15.06■□□□□ 0
LIME1-208ENST00000493265 ACTR6Q9GZN1 396 aa15.06■□□□□ 0
LIME1-208ENST00000493265 POLE4Q9NR33 117 aa15.06■□□□□ 0
LIME1-208ENST00000493265 POLR1DQ9Y2S0 133 aa15.06■□□□□ 0
LIME1-208ENST00000493265 POLQO75417 2590 aa15.05■□□□□ 0
LIME1-208ENST00000493265 CCDC182A6NF36 153 aa15.05■□□□□ -0
LIME1-208ENST00000493265 PRODHO43272 600 aa15.05■□□□□ -0
LIME1-208ENST00000493265 FARS2O95363 451 aaKnown RBP15.05■□□□□ -0
LIME1-208ENST00000493265 TFP02787 698 aa15.05■□□□□ -0
LIME1-208ENST00000493265 MRPL3P09001 348 aaKnown RBP15.05■□□□□ -0
LIME1-208ENST00000493265 PATE4P0C8F1 98 aa15.05■□□□□ -0
LIME1-208ENST00000493265 OR8G3PP0DMU2 310 aa15.05■□□□□ -0
LIME1-208ENST00000493265 CD79AP11912 226 aa15.05■□□□□ -0
LIME1-208ENST00000493265 GABRB1P18505 474 aa15.05■□□□□ -0
LIME1-208ENST00000493265 MSR1P21757 451 aa15.05■□□□□ -0
LIME1-208ENST00000493265 SLC2A5P22732 501 aa15.05■□□□□ -0
LIME1-208ENST00000493265 GSTT1P30711 240 aa15.05■□□□□ -0
LIME1-208ENST00000493265 CCKARP32238 428 aa15.05■□□□□ -0
LIME1-208ENST00000493265 UBE2NP61088 152 aaKnown RBP15.05■□□□□ -0
LIME1-208ENST00000493265 MRPS34P82930 218 aaKnown RBP15.05■□□□□ -0
LIME1-208ENST00000493265 TEKQ02763 1124 aa15.05■□□□□ -0
LIME1-208ENST00000493265 PIGFQ07326 219 aa15.05■□□□□ -0
LIME1-208ENST00000493265 TFF3Q07654 80 aa15.05■□□□□ -0
LIME1-208ENST00000493265 FBXL19-AS1Q494R0 122 aa15.05■□□□□ -0
LIME1-208ENST00000493265 OR7E24Q6IFN5 339 aa15.05■□□□□ -0
LIME1-208ENST00000493265 USP51Q70EK9 711 aa15.05■□□□□ -0
LIME1-208ENST00000493265 THAP5Q7Z6K1 395 aa15.05■□□□□ -0
LIME1-208ENST00000493265 ERI1Q8IV48 349 aaKnown RBP15.05■□□□□ -0
LIME1-208ENST00000493265 GID4Q8IVV7 300 aa15.05■□□□□ -0
LIME1-208ENST00000493265 SKA3Q8IX90 412 aa15.05■□□□□ -0
LIME1-208ENST00000493265 STEAP2Q8NFT2 490 aa15.05■□□□□ -0
LIME1-208ENST00000493265 NABP1Q96AH0 204 aa15.05■□□□□ -0
LIME1-208ENST00000493265 ZC3HAV1LQ96H79 300 aaKnown RBP15.05■□□□□ -0
LIME1-208ENST00000493265 TEAD3Q99594 435 aa15.05■□□□□ -0
LIME1-208ENST00000493265 NELFAQ9H3P2 528 aa15.05■□□□□ -0
LIME1-208ENST00000493265 SIAEQ9HAT2 523 aa15.05■□□□□ -0
LIME1-208ENST00000493265 RAB26Q9ULW5 256 aa15.05■□□□□ -0
LIME1-208ENST00000493265 MOKQ9UQ07 419 aa15.05■□□□□ -0
LIME1-208ENST00000493265 F8P00451 2351 aa15.05■□□□□ -0
LIME1-208ENST00000493265 C2CD3Q4AC94 2353 aa15.04■□□□□ -0
LIME1-208ENST00000493265 PKDREJQ9NTG1 2253 aa15.04■□□□□ -0
LIME1-208ENST00000493265 APOL3O95236 402 aa15.04■□□□□ -0
LIME1-208ENST00000493265 HLA-HP01893 362 aa15.04■□□□□ -0
LIME1-208ENST00000493265 GAAP10253 952 aa15.04■□□□□ -0
LIME1-208ENST00000493265 ZNF823P16415 610 aa15.04■□□□□ -0
LIME1-208ENST00000493265 NPR2P20594 1047 aa15.04■□□□□ -0
LIME1-208ENST00000493265 NAA10P41227 235 aaPredicted RBP15.04■□□□□ -0
LIME1-208ENST00000493265 RPS27P42677 84 aaKnown RBP15.04■□□□□ -0
LIME1-208ENST00000493265 ISL1P61371 349 aa15.04■□□□□ -0
LIME1-208ENST00000493265 HSF2Q03933 536 aa15.04■□□□□ -0
LIME1-208ENST00000493265 OCLNQ16625 522 aa15.04■□□□□ -0
LIME1-208ENST00000493265 SMN1Q16637 294 aaKnown RBP15.04■□□□□ -0
LIME1-208ENST00000493265 SLC35D3Q5M8T2 416 aa15.04■□□□□ -0
LIME1-208ENST00000493265 LINC01590Q5TEZ4 76 aa15.04■□□□□ -0
LIME1-208ENST00000493265 LCN1P1Q5VSP4 162 aa15.04■□□□□ -0
LIME1-208ENST00000493265 MEDAGQ5VYS4 303 aa15.04■□□□□ -0
LIME1-208ENST00000493265 SLC16A14Q7RTX9 510 aa15.04■□□□□ -0
LIME1-208ENST00000493265 C1orf162Q8NEQ5 155 aaPredicted RBP15.04■□□□□ -0
LIME1-208ENST00000493265 SLC26A10Q8NG04 563 aa15.04■□□□□ -0
LIME1-208ENST00000493265 SMAP2Q8WU79 429 aaPredicted RBP15.04■□□□□ -0
LIME1-208ENST00000493265 APH1BQ8WW43 257 aa15.04■□□□□ -0
LIME1-208ENST00000493265 RFKQ969G6 155 aa15.04■□□□□ -0
LIME1-208ENST00000493265 Q96MT0 163 aa15.04■□□□□ -0
LIME1-208ENST00000493265 ZNF416Q9BWM5 594 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms