RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 C16orf52Q8NHV5 167 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 ITFG1Q8TB96 612 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 SYNPRQ8TBG9 265 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 PLPPR1Q8TBJ4 325 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 LRRC15Q8TF66 581 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 HIST1H2ACQ93077 130 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 NEIL2Q969S2 332 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 PYURFQ96I23 114 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 WDR92Q96MX6 357 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 UHRF2Q96PU4 802 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 CPXM1Q96SM3 734 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 SSBP4Q9BWG4 385 aaPredicted RBP3.74□□□□□ -1.81
BRCA1-220ENST00000492859 MROQ9BYG7 248 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 FAM234AQ9H0X4 552 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 DPAGT1Q9H3H5 408 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 TXNIPQ9H3M7 391 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 GSTO2Q9H4Y5 243 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 CDCP1Q9H5V8 836 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 PATZ1Q9HBE1 687 aaKnown RBP3.74□□□□□ -1.81
BRCA1-220ENST00000492859 LRTM1Q9HBL6 345 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 NMRAL1Q9HBL8 299 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 SLC25A37Q9NYZ2 338 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 SLC9A2Q9UBY0 812 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 STEAP1Q9UHE8 339 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 UBQLN1Q9UMX0 589 aaKnown RBP3.74□□□□□ -1.81
BRCA1-220ENST00000492859 ING4Q9UNL4 249 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 PSG8Q9UQ74 426 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 TCF19Q9Y242 345 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 KLHDC2Q9Y2U9 406 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 CARMIL3Q8ND23 1372 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 MAP3K1Q13233 1512 aa3.74□□□□□ -1.81
BRCA1-220ENST00000492859 A0A0A6YYD5 115 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 A0A0B4J2E0 115 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 KIR2DS1A0A191URI9 304 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 A0A1B0GX12 115 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 MEIOCA2RUB1 952 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 EIF4E1BA6NMX2 242 aaKnown RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 HSPB2A8KAH6 182 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 CXorf49A8MYA2 514 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 F8VVB4 439 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 F8VWA3 439 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 AP4M1O00189 453 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 VCYO14598 125 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 FFAR3O14843 346 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 ARPC1BO15143 372 aaKnown RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 GPR42O15529 346 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 ENSAO43768 121 aaKnown RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 MFAP3LO75121 409 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 TRMUO75648 421 aaKnown RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 DIRAS1O95057 198 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 FGF19O95750 216 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 HAND1O96004 215 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 IFNA1P01562 189 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 IGF1P05019 195 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 OR56A5P0C7T3 313 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 MGMTP16455 207 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 HOXB9P17482 250 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 AK4P27144 223 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 DUSP1P28562 367 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 RFC3P40938 356 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 MAGEA5P43359 124 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 KIR2DL3P43628 341 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 HTR5AP47898 357 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 GSK3BP49841 420 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 TDGF1P3P51864 188 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 TMPRSS3P57727 454 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 LOXL3P58215 753 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 COPZ1P61923 177 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 TCP10Q12799 353 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 ITPK1Q13572 414 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 KIR2DS1Q14954 304 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 OXA1LQ15070 435 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 HSPB2Q16082 182 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 TAL2Q16559 108 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 LY6KQ17RY6 165 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 TBC1D28Q2M2D7 210 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 OR10J3Q5JRS4 329 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 HP1BP3Q5SSJ5 553 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 HENMT1Q5T8I9 393 aaKnown RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 FAM78BQ5VT40 261 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 CD276Q5ZPR3 534 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF474Q6S9Z5 364 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 CYP2R1Q6VVX0 501 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 GOLGA7Q7Z5G4 137 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 AMIGO1Q86WK6 493 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 WFDC8Q8IUA0 241 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 TRIM48Q8IWZ4 208 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 TP53INP2Q8IXH6 220 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 CPNE9Q8IYJ1 553 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 DAW1Q8N136 415 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF557Q8N988 423 aaPredicted RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 TMEM37Q8WXS4 190 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 OR8D1Q8WZ84 308 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 PYCR2Q96C36 320 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 NUS1Q96E22 293 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 FAM46AQ96IP4 442 aaKnown RBP3.73□□□□□ -1.81
BRCA1-220ENST00000492859 ZNF488Q96MN9 340 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 TSSK2Q96PF2 358 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 MRIQ9BWK5 157 aa3.73□□□□□ -1.81
BRCA1-220ENST00000492859 VN1R3Q9BXE9 311 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms