RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 AKIRIN1Q9H9L7 192 aaPredicted RBP9.62□□□□□ -0.87
USP4-214ENST00000491791 GALNT9Q9HCQ5 603 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 SLCO1C1Q9NYB5 712 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 KLRF1Q9NZS2 232 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 B3GAT1Q9P2W7 334 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 KCNG2Q9UJ96 466 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 HRH3Q9Y5N1 445 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 LAMA5O15230 3695 aa9.62□□□□□ -0.87
USP4-214ENST00000491791 APC2O95996 2303 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 FAM47E-STBD1D6RA91 191 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 CCNKO75909 580 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 TFPIP10646 304 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 ADRA2CP18825 462 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 FSTP19883 344 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 ZNF133P52736 654 aaPredicted RBP9.61□□□□□ -0.87
USP4-214ENST00000491791 TLE3Q04726 772 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 CHAF1BQ13112 559 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 CBX3Q13185 183 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 GPR176Q14439 515 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 TOMM20Q15388 145 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 OR7A5Q15622 319 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 HIST3H3Q16695 136 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 MEP1BQ16820 701 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 THEM4Q5T1C6 240 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 FAM69BQ5VUD6 431 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 TIGD3Q6B0B8 471 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 H3F3CQ6NXT2 135 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 C3orf33Q6P1S2 294 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 POMZP3Q6PJE2 187 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 PLET1Q6UQ28 207 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 TMPRSS7Q7RTY8 843 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 CATSPERDQ86XM0 798 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 PLCZ1Q86YW0 608 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 LIX1LQ8IVB5 337 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 OR52N5Q8NH56 324 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 PAQR8Q8TEZ7 354 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 SMIM4Q8WVI0 70 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 ST6GAL2Q96JF0 529 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 AMELYQ99218 206 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 NPAS1Q99742 590 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 ABHD6Q9BV23 337 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 SPRY4Q9C004 299 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 PTGES2Q9H7Z7 377 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 METTL7AQ9H8H3 244 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 ELOVL3Q9HB03 270 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 BRD7Q9NPI1 651 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 SLC17A5Q9NRA2 495 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 SACM1LQ9NTJ5 587 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 COPZ2Q9P299 210 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 ITGB1BP2Q9UKP3 347 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 FOXJ3Q9UPW0 622 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 RBMX2Q9Y388 322 aaKnown RBP9.61□□□□□ -0.87
USP4-214ENST00000491791 AK6Q9Y3D8 172 aaKnown RBP9.61□□□□□ -0.87
USP4-214ENST00000491791 HS3ST3B1Q9Y662 390 aa9.61□□□□□ -0.87
USP4-214ENST00000491791 A0A0B4J293 547 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 FAM240BA0A1B0GVZ2 78 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 ACOD1A6NK06 481 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 NPIPA5E9PKD4 350 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 ORC5O43913 435 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 SERPINI2O75830 405 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 RPP14O95059 124 aaKnown RBP9.6□□□□□ -0.87
USP4-214ENST00000491791 PMS2P2O95744 297 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 PAHP00439 452 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 CCL4P13236 92 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 ICAM2P13598 275 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 SNRPBP14678 240 aaKnown RBP9.6□□□□□ -0.87
USP4-214ENST00000491791 IFNGR1P15260 489 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 MMP16P51512 607 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 RIDAP52758 137 aaKnown RBP9.6□□□□□ -0.87
USP4-214ENST00000491791 MLF1P58340 268 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 H3F3AP84243 136 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 MYBPHQ13203 477 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 BTBD16Q32M84 506 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 WDR38Q5JTN6 314 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 FAM166AQ6J272 317 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 GLB1L2Q8IW92 636 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 CMTM4Q8IZR5 234 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 OR11G2Q8NGC1 345 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 OR6X1Q8NH79 312 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 LGALS14Q8TCE9 139 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 ST7LQ8TDW4 575 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 THAP3Q8WTV1 239 aaPredicted RBP9.6□□□□□ -0.87
USP4-214ENST00000491791 THEM6Q8WUY1 208 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 RNF133Q8WVZ7 376 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 SLC7A6Q92536 515 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 MR1Q95460 341 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 MIB2Q96AX9 1013 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 HAVCR1Q96D42 359 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 SLC25A38Q96DW6 304 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 RNF31Q96EP0 1072 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 TMEM41AQ96HV5 264 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 SGCZQ96LD1 299 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 OXGR1Q96P68 337 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 CMKLR1Q99788 373 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 TTTY10Q9BZA0 68 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 TCF7L1Q9HCS4 588 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 SLC39A1Q9NY26 324 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 AKAP7Q9P0M2 348 aaPredicted RBP9.6□□□□□ -0.87
USP4-214ENST00000491791 DKK4Q9UBT3 224 aa9.6□□□□□ -0.87
USP4-214ENST00000491791 MALT1Q9UDY8 824 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms