RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 CLDN15P56746 228 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 CLDN18P56856 261 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 PLAURQ03405 335 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 SRYQ05066 204 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 INSL4Q14641 139 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 PGGHGQ32M88 737 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 BCL2L15Q5TBC7 163 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 MTFR2Q6P444 385 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 TEX261Q6UWH6 196 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 TMEM91Q6ZNR0 172 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 LUZP2Q86TE4 346 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 OAFQ86UD1 273 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 LSRQ86X29 649 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-219ENST00000491747 ZNF808Q8N4W9 903 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-219ENST00000491747 ZNF614Q8N883 585 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 OR2T33Q8NG76 320 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 ACOT11Q8WXI4 607 aaPredicted RBP8.4□□□□□ -1.06
BRCA1-219ENST00000491747 SFXN2Q96NB2 322 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 ZNF649Q9BS31 505 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 PRR14Q9BWN1 585 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 SLC38A1Q9H2H9 487 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 DPAGT1Q9H3H5 408 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 PTGES2Q9H7Z7 377 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 EMC7Q9NPA0 242 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 KLHL28Q9NXS3 571 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 ICAM5Q9UMF0 924 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 CACNG2Q9Y698 323 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 U3KQ87 197 aa8.4□□□□□ -1.06
BRCA1-219ENST00000491747 DOCK7Q96N67 2140 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 A0A0G2JNJ9 132 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 CPSF4LA6NMK7 179 aaKnown RBP8.4□□□□□ -1.07
BRCA1-219ENST00000491747 AHRRA9YTQ3 701 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 HCRTR2O43614 444 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 SLC22A5O76082 557 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 AGR2O95994 175 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 PAHP00439 452 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 ZNF708P17019 499 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 AHCYP23526 432 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 SUCLG1P53597 346 aaKnown RBP8.4□□□□□ -1.07
BRCA1-219ENST00000491747 RIPPLY1Q0D2K3 151 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 FCN2Q15485 313 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 TOMM34Q15785 309 aaPredicted RBP8.4□□□□□ -1.07
BRCA1-219ENST00000491747 ACSF3Q4G176 576 aaPredicted RBP8.4□□□□□ -1.07
BRCA1-219ENST00000491747 TOR2AQ5JU69 321 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 RAET1LQ5VY80 246 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 PYHIN1Q6K0P9 492 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 KRT74Q7RTS7 529 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 MAMDC2Q7Z304 686 aaPredicted RBP8.4□□□□□ -1.07
BRCA1-219ENST00000491747 GID4Q8IVV7 300 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 ACBD7Q8N6N7 88 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 OR4Q3Q8NH05 313 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 POC1BQ8TC44 478 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 MAP6Q96JE9 813 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 KRCC1Q9NPI7 259 aaPredicted RBP8.4□□□□□ -1.07
BRCA1-219ENST00000491747 TRIM36Q9NQ86 728 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 NUDT15Q9NV35 164 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 BABAM2Q9NXR7 383 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 CALML5Q9NZT1 146 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 COPZ2Q9P299 210 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 Q9UFV3 132 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 KCNN3Q9UGI6 736 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 ZNF222Q9UK12 451 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 ELF5Q9UKW6 265 aaPredicted RBP8.4□□□□□ -1.07
BRCA1-219ENST00000491747 NUP50Q9UKX7 468 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 MGAT4AQ9UM21 535 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 WDR45Q9Y484 360 aa8.4□□□□□ -1.07
BRCA1-219ENST00000491747 SETXQ7Z333 2677 aaKnown RBP8.4□□□□□ -1.07
BRCA1-219ENST00000491747 LINC00862A6NCI5 91 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 SERINC4A6NH21 518 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 GUSBP08236 651 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 GABRA1P14867 456 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 IL11P20809 199 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 MSX1P28360 303 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 PLPPR5Q32ZL2 321 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 KLHL12Q53G59 568 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 HSD17B12Q53GQ0 312 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 CD276Q5ZPR3 534 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 TMEM211Q6ICI0 200 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 SMARCD3Q6STE5 483 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 ZNF620Q6ZNG0 422 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 TPRA1Q86W33 373 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 MISPQ8IVT2 679 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 TIGD4Q8IY51 512 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 ZNF619Q8N2I2 560 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 SAMD12Q8N8I0 201 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 SPERTQ8NA61 448 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 ZNF527Q8NB42 609 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 NAXEQ8NCW5 288 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 TOR1AIP2Q8NFQ8 470 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 RND1Q92730 232 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 OR2M2Q96R28 347 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 ARHGDIGQ99819 225 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 PPIL3Q9H2H8 161 aaKnown RBP8.39□□□□□ -1.07
BRCA1-219ENST00000491747 GLTPQ9NZD2 209 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 NUBP2Q9Y5Y2 271 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 MED12LQ86YW9 2145 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 NBPF19A0A087WUL8 3843 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 CACNA1CQ13936 2221 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 TRAV6A0A075B6T7 132 aa8.39□□□□□ -1.07
BRCA1-219ENST00000491747 LOC105371267A0A1B0GV96 52 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms