RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 FN1P02751 2386 aaKnown RBP14.25□□□□□ -0.13
PDLIM2-217ENST00000491330 IGHV4-61A0A0C4DH41 118 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 A0A1W2PPL8 197 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 ANPEPP15144 967 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 TCN1P20061 433 aaPredicted RBP14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 CALB2P22676 271 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 LIPAP38571 399 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 ALDH3B1P43353 468 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 ZNF133P52736 654 aaPredicted RBP14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 CDH15P55291 814 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 MXRA7P84157 204 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 ZBED5Q49AG3 693 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 ZMAT1Q5H9K5 638 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 PABPC1L2AQ5JQF8 200 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 MBOAT2Q6ZWT7 520 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 ZER1Q7Z7L7 766 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 ZCCHC24Q8N2G6 241 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 TEX29Q8N6K0 151 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 ARIH2OSQ8N7S6 290 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 OR1J1Q8NGS3 322 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 MSI2Q96DH6 328 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 CD300AQ9UGN4 299 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 ADAM21Q9UKJ8 722 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 NDRG4Q9ULP0 352 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 SNX13Q9Y5W8 968 aa14.24□□□□□ -0.13
PDLIM2-217ENST00000491330 C5orf49A4QMS7 147 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 PRSS23O95084 383 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 SLC2A10O95528 541 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 IGHMP01871 453 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 H1F0P07305 194 aaKnown RBP14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 CST2P09228 141 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 TACSTD2P09758 323 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 MSR1P21757 451 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 THBS2P35442 1172 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 SRP14P37108 136 aaKnown RBP14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 RUNX1T1Q06455 604 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 FGD3Q5JSP0 725 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 LIPNQ5VXI9 398 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 TMPRSS11FQ6ZWK6 438 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 CXXC5Q7LFL8 322 aaKnown RBP14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 SYT9Q86SS6 491 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 ZNF584Q8IVC4 421 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 HDAC2Q92769 488 aaKnown RBP14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 TIMD4Q96H15 378 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 NSL1Q96IY1 281 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 NSMCE2Q96MF7 247 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 COG8Q96MW5 612 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 SNX18Q96RF0 628 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 EGLN1Q9GZT9 426 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 C1orf21Q9H246 121 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 OR51B6Q9H340 312 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 NMNAT1Q9HAN9 279 aaPredicted RBP14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 FAM53CQ9NYF3 392 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 CGGBP1Q9UFW8 167 aaPredicted RBP14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 EGFL7Q9UHF1 273 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 FZR1Q9UM11 496 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 TLN2Q9Y4G6 2542 aa14.23□□□□□ -0.13
PDLIM2-217ENST00000491330 JMJD1CQ15652 2540 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 TRAV27A0A087WT01 109 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 C17orf100A8MU93 164 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 B4DSR2 109 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 PPIHO43447 177 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 PIP5K1CO60331 668 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 CCL2P13500 99 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 ZNF250P15622 560 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 HOXB6P17509 224 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 TUBG1P23258 451 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 CDAP32320 146 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 IFNGR2P38484 337 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 GPR139Q6DWJ6 353 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 DNM1P34Q6PK57 102 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 SLC25A47Q6Q0C1 308 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 PEG10Q86TG7 708 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 DEFB107AQ8IZN7 70 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 FITM2Q8N6M3 262 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 FGFBP3Q8TAT2 258 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 PYURFQ96I23 114 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 ZNF570Q96NI8 536 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 CDRT15Q96T59 188 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 TUBG2Q9NRH3 451 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 MAN2C1Q9NTJ4 1040 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 ARL8BQ9NVJ2 186 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 NKIRAS2Q9NYR9 191 aa14.22□□□□□ -0.13
PDLIM2-217ENST00000491330 A0A087WUU8 490 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 FFAR1O14842 300 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 NDUFB2O95178 105 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 TFP02787 698 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 CD14P08571 375 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 MMP7P09237 267 aaPredicted RBP14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 NAT2P11245 290 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 ZNF32P17041 273 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 MAKP20794 623 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 GSTM3P21266 225 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 RPS6KA3P51812 740 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 SLC3A1Q07837 685 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 SCRN3Q0VDG4 424 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 RIN1Q13671 783 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 MAD2L1BPQ15013 274 aaPredicted RBP14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 HFEQ30201 348 aa14.21□□□□□ -0.13
PDLIM2-217ENST00000491330 FAM120AOSQ5T036 256 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms