RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 CMTM5Q96DZ9 223 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 POM121L2Q96KW2 1035 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 LRMDAQ9H2I8 198 aa15.4■□□□□ 0.06
HMGN1-219ENST00000491183 COL6A5A8TX70 2615 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 A6NIZ1 184 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 SCG5P05408 212 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 NR2C1P13056 603 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 DRD4P21917 467 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 CCNOP22674 350 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 STOMP27105 288 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 WNT5AP41221 380 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 KLF3P57682 345 aaPredicted RBP15.39■□□□□ 0.05
HMGN1-219ENST00000491183 RAP1BP61224 184 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 RAP1AP62834 184 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 NKPD1Q17RQ9 610 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 FAM205BPQ63HN1 556 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 GLYATQ6IB77 296 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 OR1J1Q8NGS3 322 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 SPATA3Q8NHX4 192 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 FNDC8Q8TC99 324 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 C1orf159Q96HA4 380 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 BCL2L14Q9BZR8 327 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 WNT5BQ9H1J7 359 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 ANKRD19PQ9H560 264 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 NDUFAF4Q9P032 175 aa15.39■□□□□ 0.05
HMGN1-219ENST00000491183 GMNCA6NCL1 334 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 C17orf100A8MU93 164 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 H7C1C5 153 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 SNX3O60493 162 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 PTP4A3O75365 173 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 CST2P09228 141 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 ACHEP22303 614 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 PRDX6P30041 224 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 SELENOVP59797 346 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 LCN6P62502 163 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 ENDOGQ14249 297 aaKnown RBP15.38■□□□□ 0.05
HMGN1-219ENST00000491183 ZBED5Q49AG3 693 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 TMEM255AQ5JRV8 349 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 ZNF101Q8IZC7 436 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 RNF148Q8N7C7 305 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 FAM86B1Q8N7N1 296 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 FAM156AQ8NDB6 213 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 ICA1LQ8NDH6 482 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 GTF3AQ92664 365 aaKnown RBP15.38■□□□□ 0.05
HMGN1-219ENST00000491183 C7orf34Q96L11 122 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 Q96M85 177 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 OR2H1Q9GZK4 316 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 RACGAP1Q9H0H5 632 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 HINT3Q9NQE9 182 aaKnown RBP15.38■□□□□ 0.05
HMGN1-219ENST00000491183 ZNF275Q9NSD4 429 aaPredicted RBP15.38■□□□□ 0.05
HMGN1-219ENST00000491183 DCAF13Q9NV06 445 aaKnown RBP15.38■□□□□ 0.05
HMGN1-219ENST00000491183 RPS6KA6Q9UK32 745 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 ADAM18Q9Y3Q7 739 aa15.38■□□□□ 0.05
HMGN1-219ENST00000491183 SVEP1Q4LDE5 3571 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 C5orf49A4QMS7 147 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 RNF212BA8MTL3 300 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 WNT9BO14905 357 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 RP2O75695 350 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 IGHV3-13P01766 116 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 H1F0P07305 194 aaKnown RBP15.37■□□□□ 0.05
HMGN1-219ENST00000491183 CD14P08571 375 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 RPL4P36578 427 aaKnown RBP15.37■□□□□ 0.05
HMGN1-219ENST00000491183 GPR6P46095 362 aaPredicted RBP15.37■□□□□ 0.05
HMGN1-219ENST00000491183 CDH15P55291 814 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 MRPS11P82912 194 aaKnown RBP15.37■□□□□ 0.05
HMGN1-219ENST00000491183 CCNIQ14094 377 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 CR1LQ2VPA4 569 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 MESTQ5EB52 335 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 UGT2A3Q6UWM9 527 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 RRM2BQ7LG56 351 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 FAM122BQ7Z309 247 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 CYP4Z1Q86W10 505 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 LINC01356Q8N9X3 169 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 FAM46AQ96IP4 442 aaKnown RBP15.37■□□□□ 0.05
HMGN1-219ENST00000491183 FAM107BQ9H098 131 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 SPAG4Q9NPE6 437 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 SLCO1C1Q9NYB5 712 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 TIMM10BQ9Y5J6 103 aa15.37■□□□□ 0.05
HMGN1-219ENST00000491183 A0A1W2PPL8 197 aa15.36■□□□□ 0.05
HMGN1-219ENST00000491183 A0A1W2PRQ8 180 aa15.36■□□□□ 0.05
HMGN1-219ENST00000491183 PHF1O43189 567 aaPredicted RBP15.36■□□□□ 0.05
HMGN1-219ENST00000491183 DIRAS1O95057 198 aa15.36■□□□□ 0.05
HMGN1-219ENST00000491183 SRD5A1P18405 259 aa15.36■□□□□ 0.05
HMGN1-219ENST00000491183 MPV17P39210 176 aa15.36■□□□□ 0.05
HMGN1-219ENST00000491183 OMPP47874 163 aa15.36■□□□□ 0.05
HMGN1-219ENST00000491183 LIMS1P48059 325 aa15.36■□□□□ 0.05
HMGN1-219ENST00000491183 GDI2P50395 445 aaKnown RBP15.36■□□□□ 0.05
HMGN1-219ENST00000491183 TMEM33P57088 247 aa15.36■□□□□ 0.05
HMGN1-219ENST00000491183 DGCR6Q14129 220 aa15.36■□□□□ 0.05
HMGN1-219ENST00000491183 ZNF774Q6NX45 483 aa15.36■□□□□ 0.05
HMGN1-219ENST00000491183 PHC2Q8IXK0 858 aa15.36■□□□□ 0.05
HMGN1-219ENST00000491183 CLDND2Q8NHS1 167 aa15.36■□□□□ 0.05
HMGN1-219ENST00000491183 MARS2Q96GW9 593 aaKnown RBP15.36■□□□□ 0.05
HMGN1-219ENST00000491183 ZNF416Q9BWM5 594 aa15.36■□□□□ 0.05
HMGN1-219ENST00000491183 POLE4Q9NR33 117 aa15.36■□□□□ 0.05
HMGN1-219ENST00000491183 NKIRAS2Q9NYR9 191 aa15.36■□□□□ 0.05
HMGN1-219ENST00000491183 ADA2Q9NZK5 511 aa15.36■□□□□ 0.05
HMGN1-219ENST00000491183 EIF3KQ9UBQ5 218 aaKnown RBP15.36■□□□□ 0.05
HMGN1-219ENST00000491183 GRHPRQ9UBQ7 328 aa15.36■□□□□ 0.05
HMGN1-219ENST00000491183 GPR160Q9UJ42 338 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms