RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 CDADC1Q9BWV3 514 aa12.35□□□□□ -0.43
SMPD4-219ENST00000491128 RBM24Q9BX46 236 aaKnown RBP12.35□□□□□ -0.43
SMPD4-219ENST00000491128 J3QRK9 145 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 TFECO14948 347 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-219ENST00000491128 KHDRBS3O75525 346 aaKnown RBP12.34□□□□□ -0.43
SMPD4-219ENST00000491128 UPK3AO75631 287 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 OPRL1P41146 370 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 GDI2P50395 445 aaKnown RBP12.34□□□□□ -0.43
SMPD4-219ENST00000491128 GBX2P52951 348 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-219ENST00000491128 ACTA2P62736 377 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 ACTG2P63267 376 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 RASGEF1BQ0VAM2 473 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 SGCAQ16586 387 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 C9orf135Q5VTT2 229 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 FCRLAQ7L513 359 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 SNX29P2Q8IUI4 249 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 SPACA3Q8IXA5 215 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 FLVCR1Q9Y5Y0 555 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 ZNF716A6NP11 495 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 PNPP00491 289 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 GAAP10253 952 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 CSNK1A1P48729 337 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 DGUOKQ16854 277 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 DMKNQ6E0U4 476 aaPredicted RBP12.34□□□□□ -0.43
SMPD4-219ENST00000491128 GLB1L2Q8IW92 636 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 FAM109AQ8N4B1 249 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 OR10AC1Q8NH08 325 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 MCFD2Q8NI22 146 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 GLTPQ9NZD2 209 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 FRRS1LQ9P0K9 344 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 SLC22A13Q9Y226 551 aa12.34□□□□□ -0.43
SMPD4-219ENST00000491128 PLPP2O43688 288 aa12.33□□□□□ -0.43
SMPD4-219ENST00000491128 FZD7O75084 574 aa12.33□□□□□ -0.43
SMPD4-219ENST00000491128 ZFPL1O95159 310 aa12.33□□□□□ -0.43
SMPD4-219ENST00000491128 ABHD16AO95870 558 aa12.33□□□□□ -0.43
SMPD4-219ENST00000491128 KRT8P05787 483 aa12.33□□□□□ -0.43
SMPD4-219ENST00000491128 ZNF708P17019 499 aa12.33□□□□□ -0.43
SMPD4-219ENST00000491128 ZNF24P17028 368 aa12.33□□□□□ -0.43
SMPD4-219ENST00000491128 PTGS2P35354 604 aa12.33□□□□□ -0.43
SMPD4-219ENST00000491128 ACSM1Q08AH1 577 aa12.33□□□□□ -0.43
SMPD4-219ENST00000491128 CDK5R1Q15078 307 aa12.33□□□□□ -0.43
SMPD4-219ENST00000491128 THEM4Q5T1C6 240 aa12.33□□□□□ -0.43
SMPD4-219ENST00000491128 CEACAM19Q7Z692 300 aa12.33□□□□□ -0.43
SMPD4-219ENST00000491128 OR51A4Q8NGJ6 313 aa12.33□□□□□ -0.43
SMPD4-219ENST00000491128 ABHD4Q8TB40 342 aa12.33□□□□□ -0.43
SMPD4-219ENST00000491128 OR14A2Q96R54 314 aa12.33□□□□□ -0.43
SMPD4-219ENST00000491128 ISYNA1Q9NPH2 558 aa12.33□□□□□ -0.43
SMPD4-219ENST00000491128 ASH2LQ9UBL3 628 aa12.33□□□□□ -0.43
SMPD4-219ENST00000491128 POLR1DQ9Y2S0 133 aa12.33□□□□□ -0.43
SMPD4-219ENST00000491128 MRPS18CQ9Y3D5 142 aaKnown RBP12.33□□□□□ -0.43
SMPD4-219ENST00000491128 TRGV5A0A0B4J1U4 118 aa12.33□□□□□ -0.44
SMPD4-219ENST00000491128 METTL15A6NJ78 407 aa12.33□□□□□ -0.44
SMPD4-219ENST00000491128 CTDSP2O14595 271 aa12.33□□□□□ -0.44
SMPD4-219ENST00000491128 RER1O15258 196 aa12.33□□□□□ -0.44
SMPD4-219ENST00000491128 LAP3P28838 519 aa12.33□□□□□ -0.44
SMPD4-219ENST00000491128 MFGE8Q08431 387 aaPredicted RBP12.33□□□□□ -0.44
SMPD4-219ENST00000491128 KRT77Q7Z794 578 aa12.33□□□□□ -0.44
SMPD4-219ENST00000491128 TUSC5Q8IXB3 177 aa12.33□□□□□ -0.44
SMPD4-219ENST00000491128 TMEM123Q8N131 208 aa12.33□□□□□ -0.44
SMPD4-219ENST00000491128 KBTBD8Q8NFY9 601 aa12.33□□□□□ -0.44
SMPD4-219ENST00000491128 OR5M9Q8NGP3 310 aa12.33□□□□□ -0.44
SMPD4-219ENST00000491128 NEIL3Q8TAT5 605 aa12.33□□□□□ -0.44
SMPD4-219ENST00000491128 MAP6Q96JE9 813 aa12.33□□□□□ -0.44
SMPD4-219ENST00000491128 KCTD7Q96MP8 289 aa12.33□□□□□ -0.44
SMPD4-219ENST00000491128 TAAR6Q96RI8 345 aa12.33□□□□□ -0.44
SMPD4-219ENST00000491128 RNF32Q9H0A6 362 aa12.33□□□□□ -0.44
SMPD4-219ENST00000491128 CALHM2Q9HA72 323 aa12.33□□□□□ -0.44
SMPD4-219ENST00000491128 CAMK2AQ9UQM7 478 aa12.33□□□□□ -0.44
SMPD4-219ENST00000491128 NPIPB13A6NJU9 1138 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 ACOD1A6NK06 481 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 NPIPB4C9JG80 1138 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 ACOT7O00154 380 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 HLA-DPB1P04440 258 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 PATE4P0C8F1 98 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 ANOS1P23352 680 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 SOX2P48431 317 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 HNRNPA0Q13151 305 aaKnown RBP12.32□□□□□ -0.44
SMPD4-219ENST00000491128 ACSM3Q53FZ2 586 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 SLC18B1Q6NT16 456 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 DNM1P34Q6PK57 102 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 SLC25A47Q6Q0C1 308 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 CFAP77Q6ZQR2 320 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 LINGO2Q7L985 606 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 FAM220AQ7Z4H9 259 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 SYS1Q8N2H4 156 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 EXTL1Q92935 676 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 SNX18Q96RF0 628 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 PRRG4Q9BZD6 226 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 QPCTLQ9NXS2 382 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 PTPRQQ9UMZ3 2332 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 CASKO14936 926 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 ZNF432O94892 652 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 OR10A3P58181 314 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 RPS11P62280 158 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMPD4-219ENST00000491128 IGFL2Q6UWQ7 119 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 AAED1Q7RTV5 226 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 NR2C2APQ86WQ0 139 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 PRSS35Q8N3Z0 413 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 OR10H5Q8NGA6 315 aa12.32□□□□□ -0.44
SMPD4-219ENST00000491128 RGP1Q92546 391 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms