RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 PRR23D2P0DMB1 279 aaPredicted RBP13.8□□□□□ -0.2
TRA2A-208ENST00000490942 SPI1P17947 270 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 EPHA2P29317 976 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 CDAP32320 146 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 RAB1AP62820 205 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 SCRN3Q0VDG4 424 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 AQP6Q13520 282 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 ETFDHQ16134 617 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 SGCAQ16586 387 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 SLC35D3Q5M8T2 416 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 TMEM236Q5W0B7 351 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 TMEM53Q6P2H8 277 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 CYB561A3Q8NBI2 242 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 PROKR2Q8NFJ6 384 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 OR8J1Q8NGP2 316 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 PTP4A1Q93096 173 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 ZNF75AQ96N20 296 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 TSSK2Q96PF2 358 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 VCXQ9H320 206 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 RIBC2Q9H4K1 309 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 SMPD3Q9NY59 655 aaPredicted RBP13.8□□□□□ -0.2
TRA2A-208ENST00000490942 TVP23BQ9NYZ1 205 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 NPAP1Q9NZP6 1156 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 TIMM10BQ9Y5J6 103 aa13.8□□□□□ -0.2
TRA2A-208ENST00000490942 H0YJX3 145 aa13.79□□□□□ -0.2
TRA2A-208ENST00000490942 SLC16A6O15403 523 aa13.79□□□□□ -0.2
TRA2A-208ENST00000490942 SERPINA5P05154 406 aa13.79□□□□□ -0.2
TRA2A-208ENST00000490942 CD40P25942 277 aa13.79□□□□□ -0.2
TRA2A-208ENST00000490942 LOXP28300 417 aaPredicted RBP13.79□□□□□ -0.2
TRA2A-208ENST00000490942 PEX2P28328 305 aa13.79□□□□□ -0.2
TRA2A-208ENST00000490942 CAPZA2P47755 286 aa13.79□□□□□ -0.2
TRA2A-208ENST00000490942 CDC42P60953 191 aa13.79□□□□□ -0.2
TRA2A-208ENST00000490942 ENDOGQ14249 297 aaKnown RBP13.79□□□□□ -0.2
TRA2A-208ENST00000490942 TEX30Q5JUR7 227 aa13.79□□□□□ -0.2
TRA2A-208ENST00000490942 ADAM5Q6NVV9 412 aa13.79□□□□□ -0.2
TRA2A-208ENST00000490942 MDP1Q86V88 176 aa13.79□□□□□ -0.2
TRA2A-208ENST00000490942 PLPPR2Q96GM1 343 aa13.79□□□□□ -0.2
TRA2A-208ENST00000490942 PITX2Q99697 317 aa13.79□□□□□ -0.2
TRA2A-208ENST00000490942 SH3GL3Q99963 347 aa13.79□□□□□ -0.2
TRA2A-208ENST00000490942 CCNB1IP1Q9NPC3 277 aa13.79□□□□□ -0.2
TRA2A-208ENST00000490942 NDRG4Q9ULP0 352 aaKnown RBP13.79□□□□□ -0.2
TRA2A-208ENST00000490942 FLNBO75369 2602 aaKnown RBP13.78□□□□□ -0.2
TRA2A-208ENST00000490942 A0A1W2PR80 420 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 ZNF503-AS2A6NEH8 195 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 DPRXA6NFQ7 191 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 SIAH2O43255 324 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 GLCEO94923 617 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 CD3EP07766 207 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 COX5BP10606 129 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 CD79AP11912 226 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 ZNF14P17017 642 aaPredicted RBP13.78□□□□□ -0.2
TRA2A-208ENST00000490942 FMO3P31513 532 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 GGT2P36268 569 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 POLR2IP36954 125 aaKnown RBP13.78□□□□□ -0.2
TRA2A-208ENST00000490942 ZNF83P51522 516 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 TLE4Q04727 773 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 PLP2Q04941 152 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 KEAP1Q14145 624 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 PCK2Q16822 640 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 SLC25A30Q5SVS4 291 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 LINC01590Q5TEZ4 76 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 NXNL2Q5VZ03 156 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 ZNF787Q6DD87 383 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 PLBD1Q6P4A8 553 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 CXXC5Q7LFL8 322 aaKnown RBP13.78□□□□□ -0.2
TRA2A-208ENST00000490942 CPOQ8IVL8 374 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 ALDH16A1Q8IZ83 802 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 DEPDC4Q8N2C3 294 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 TMEM163Q8TC26 289 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 C11orf40Q8WZ69 217 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 FBXO17Q96EF6 278 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 ZNF416Q9BWM5 594 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 TOR3AQ9H497 397 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 RERGLQ9H628 205 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 MARCH7Q9H992 704 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 HINT3Q9NQE9 182 aaKnown RBP13.78□□□□□ -0.2
TRA2A-208ENST00000490942 ATPIF1Q9UII2 106 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 RNF115Q9Y4L5 304 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 UNC79Q9P2D8 2635 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 ABCA4P78363 2273 aa13.78□□□□□ -0.2
TRA2A-208ENST00000490942 IGHV1-18A0A0C4DH31 117 aa13.77□□□□□ -0.21
TRA2A-208ENST00000490942 PRKYO43930 277 aa13.77□□□□□ -0.21
TRA2A-208ENST00000490942 MPZL2O60487 215 aa13.77□□□□□ -0.21
TRA2A-208ENST00000490942 TMCC2O75069 709 aa13.77□□□□□ -0.21
TRA2A-208ENST00000490942 TFP02787 698 aa13.77□□□□□ -0.21
TRA2A-208ENST00000490942 ZNF32P17041 273 aa13.77□□□□□ -0.21
TRA2A-208ENST00000490942 HIST1H3AP68431 136 aa13.77□□□□□ -0.21
TRA2A-208ENST00000490942 TEKQ02763 1124 aa13.77□□□□□ -0.21
TRA2A-208ENST00000490942 BSPH1Q075Z2 132 aa13.77□□□□□ -0.21
TRA2A-208ENST00000490942 TMED1Q13445 227 aa13.77□□□□□ -0.21
TRA2A-208ENST00000490942 HIST2H3PS2Q5TEC6 136 aa13.77□□□□□ -0.21
TRA2A-208ENST00000490942 LPCAT4Q643R3 524 aa13.77□□□□□ -0.21
TRA2A-208ENST00000490942 HIST2H3AQ71DI3 136 aa13.77□□□□□ -0.21
TRA2A-208ENST00000490942 LRRC18Q8N456 261 aa13.77□□□□□ -0.21
TRA2A-208ENST00000490942 GJC3Q8NFK1 279 aa13.77□□□□□ -0.21
TRA2A-208ENST00000490942 OR10H5Q8NGA6 315 aa13.77□□□□□ -0.21
TRA2A-208ENST00000490942 OR9Q1Q8NGQ5 310 aa13.77□□□□□ -0.21
TRA2A-208ENST00000490942 IPCEF1Q8WWN9 437 aaPredicted RBP13.77□□□□□ -0.21
TRA2A-208ENST00000490942 PIK3IP1Q96FE7 263 aa13.77□□□□□ -0.21
TRA2A-208ENST00000490942 MBOAT4Q96T53 435 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms