RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 LYZP61626 148 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 STXBP1P61764 594 aaKnown RBP2.99□□□□□ -1.93
XRN1-213ENST00000489241 GNB2P62879 340 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 SP4Q02446 784 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 NCF4Q15080 339 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 ZNF726P1Q15940 193 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 OTPQ5XKR4 325 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 FRMPD2BQ6IN97 320 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 DUX4L9Q6RFH8 374 aaPredicted RBP2.99□□□□□ -1.93
XRN1-213ENST00000489241 C6orf89Q6UWU4 347 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 VTCN1Q7Z7D3 282 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 LINC00523Q86TU6 105 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 APRG1Q8IVJ8 170 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 PROKR2Q8NFJ6 384 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 NPBQ8NG41 125 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 LINC01006Q8NI28 216 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 GEMIN6Q8WXD5 167 aaKnown RBP2.99□□□□□ -1.93
XRN1-213ENST00000489241 TOP1MTQ969P6 601 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 ASB9Q96DX5 294 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 CERS2Q96G23 380 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 AURKBQ96GD4 344 aaPredicted RBP2.99□□□□□ -1.93
XRN1-213ENST00000489241 YTHDF1Q9BYJ9 559 aaKnown RBP2.99□□□□□ -1.93
XRN1-213ENST00000489241 CLMPQ9H6B4 373 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 ACP6Q9NPH0 428 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 KCNJ16Q9NPI9 418 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 DUX4Q9UBX2 424 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 ST3GAL6Q9Y274 331 aa2.99□□□□□ -1.93
XRN1-213ENST00000489241 F11RQ9Y624 299 aaKnown RBP2.99□□□□□ -1.93
XRN1-213ENST00000489241 LYRM9A8MSI8 78 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 SMKR1H3BMG3 65 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 TRAF3IP2O43734 574 aaPredicted RBP2.98□□□□□ -1.93
XRN1-213ENST00000489241 FKBP6O75344 327 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 KRTAP1-4P0C5Y4 121 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 DNAH10OSP0CZ25 163 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 CD1EP15812 388 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 AK4P27144 223 aaPredicted RBP2.98□□□□□ -1.93
XRN1-213ENST00000489241 CD82P27701 267 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 HRH1P35367 487 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 TNFSF9P41273 254 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 RPS15AP62244 130 aaKnown RBP2.98□□□□□ -1.93
XRN1-213ENST00000489241 MXD1Q05195 221 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 DAZ2Q13117 558 aaKnown RBP2.98□□□□□ -1.93
XRN1-213ENST00000489241 GUCA2BQ16661 112 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 ZBED5Q49AG3 693 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 TMEM179Q6ZVK1 233 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 FAM122BQ7Z309 247 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 TMEM150AQ86TG1 271 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 CMTM8Q8IZV2 173 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 SUMF2Q8NBJ7 301 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 CA5BP1Q8WTZ4 195 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 COL21A1Q96P44 957 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 ECSITQ9BQ95 431 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 MYOZ2Q9NPC6 264 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 SLCO1B3Q9NPD5 702 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 DAZ3Q9NR90 486 aaKnown RBP2.98□□□□□ -1.93
XRN1-213ENST00000489241 CTPS2Q9NRF8 586 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 TRAPPC4Q9Y296 219 aa2.98□□□□□ -1.93
XRN1-213ENST00000489241 RCL1Q9Y2P8 373 aaKnown RBP2.98□□□□□ -1.93
XRN1-213ENST00000489241 NEURL4Q96JN8 1562 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 A0A1W2PNU3 283 aaPredicted RBP2.97□□□□□ -1.93
XRN1-213ENST00000489241 A0A1W2PRD5 423 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 TMEM120BA0PK00 339 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 PRSS37A4D1T9 235 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 SERPINE3A8MV23 424 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 H3BNH8 94 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 PEX7O00628 323 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 NUPL2O15504 423 aaKnown RBP2.97□□□□□ -1.93
XRN1-213ENST00000489241 ICOSLGO75144 302 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 KLF8O95600 359 aaPredicted RBP2.97□□□□□ -1.93
XRN1-213ENST00000489241 SNAI1O95863 264 aaPredicted RBP2.97□□□□□ -1.93
XRN1-213ENST00000489241 CSTAP01040 98 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 CALM1P0DP23 149 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 CALM2P0DP24 149 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 CALM3P0DP25 149 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 CRISP2P16562 243 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 CNR1P21554 472 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 RND2P52198 227 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 NCBP2P52298 156 aaKnown RBP eCLIP2.97□□□□□ -1.93
XRN1-213ENST00000489241 SH3BGRP55822 239 aaPredicted RBP2.97□□□□□ -1.93
XRN1-213ENST00000489241 OR7A5Q15622 319 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 PSMD5Q16401 504 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 RFX4Q33E94 735 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 KRTAP13-3Q3SY46 172 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 CCNJQ5T5M9 372 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 H3F3CQ6NXT2 135 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 ZNF621Q6ZSS3 439 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 COX15Q7KZN9 410 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 MRPL21Q7Z2W9 205 aaKnown RBP2.97□□□□□ -1.93
XRN1-213ENST00000489241 PDCL2Q8N4E4 241 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 ZFP41Q8N8Y5 198 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 DCAF4L2Q8NA75 395 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 OR2A1Q8NGT9 310 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 NAT6Q93015 286 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 EEF1AKMT3Q96AZ1 226 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 DNAJC1Q96KC8 554 aaKnown RBP2.97□□□□□ -1.93
XRN1-213ENST00000489241 C9orf72Q96LT7 481 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 PIGUQ9H490 435 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 TMEM38AQ9H6F2 299 aa2.97□□□□□ -1.93
XRN1-213ENST00000489241 PRSS16Q9NQE7 514 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms