RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 PSG4Q00888 419 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 CCNIQ14094 377 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 NKPD1Q17RQ9 610 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 ZBED5Q49AG3 693 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 MESTQ5EB52 335 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 THEM4Q5T1C6 240 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 UGT2A3Q6UWM9 527 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 TMPRSS11FQ6ZWK6 438 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 ZNF101Q8IZC7 436 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 RNF113BQ8IZP6 322 aaKnown RBP12.01□□□□□ -0.49
VTI1A-206ENST00000489142 ZNF786Q8N393 782 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 OR1J1Q8NGS3 322 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 C7orf34Q96L11 122 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 RBP7Q96R05 134 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 WNT5BQ9H1J7 359 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 NARFLQ9H6Q4 476 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 SMURF2Q9HAU4 748 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 GRHPRQ9UBQ7 328 aa12.01□□□□□ -0.49
VTI1A-206ENST00000489142 FBXO9Q9UK97 447 aaPredicted RBP12.01□□□□□ -0.49
VTI1A-206ENST00000489142 FAM32AQ9Y421 112 aaKnown RBP12.01□□□□□ -0.49
VTI1A-206ENST00000489142 TEX13CA0A0J9YWL9 993 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 C5orf49A4QMS7 147 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 HTR3EA5X5Y0 456 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 A6NIZ1 184 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 SOCS2O14508 198 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 LMX1BO60663 402 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 LILRA1O75019 489 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 GMNNO75496 209 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 SNAP29O95721 258 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 PTHP01270 115 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 CD14P08571 375 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 GIFP27352 417 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 WNT5AP41221 380 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 OMPP47874 163 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 GZMKP49863 264 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 KLF3P57682 345 aaPredicted RBP12□□□□□ -0.49
VTI1A-206ENST00000489142 RAP1BP61224 184 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 RAP1AP62834 184 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 DBPQ10586 325 aaPredicted RBP12□□□□□ -0.49
VTI1A-206ENST00000489142 RIN1Q13671 783 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 TMEM255AQ5JRV8 349 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 FAM205BPQ63HN1 556 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 ZNF774Q6NX45 483 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 THSD4Q6ZMP0 1018 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 OR1J2Q8NGS2 313 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 SYNPRQ8TBG9 265 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 YIPF5Q969M3 257 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 RSRC1Q96IZ7 334 aaKnown RBP12□□□□□ -0.49
VTI1A-206ENST00000489142 ZNF570Q96NI8 536 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 ZNF416Q9BWM5 594 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 OR2H1Q9GZK4 316 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 MS4A5Q9H3V2 200 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 C1orf198Q9H425 327 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 ANKRD19PQ9H560 264 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 RERGLQ9H628 205 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 TAGLN3Q9UI15 199 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 SAMD4AQ9UPU9 718 aaKnown RBP12□□□□□ -0.49
VTI1A-206ENST00000489142 ARL2BPQ9Y2Y0 163 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12□□□□□ -0.492e-6■□□□□ 8.2
VTI1A-206ENST00000489142 SVEP1Q4LDE5 3571 aa12□□□□□ -0.49
VTI1A-206ENST00000489142 A0A1W2PRQ8 180 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 SLC22A23A1A5C7 686 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 ARPC2O15144 300 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 NR2C1P13056 603 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 ZNF250P15622 560 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 CTLA4P16410 223 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 RHCEP18577 417 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 MPV17P39210 176 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 RAD52P43351 418 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 LIMS1P48059 325 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 GDI2P50395 445 aaKnown RBP11.99□□□□□ -0.49
VTI1A-206ENST00000489142 FXYD6P3P58550 94 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 MXRA7P84157 204 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 SPIBQ01892 262 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 KRR1Q13601 381 aaKnown RBP11.99□□□□□ -0.49
VTI1A-206ENST00000489142 DGCR6Q14129 220 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 ENDOGQ14249 297 aaKnown RBP11.99□□□□□ -0.49
VTI1A-206ENST00000489142 ANKDD1AQ495B1 522 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 FAM27BQ5VT28 67 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 FAM166AQ6J272 317 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 FOXL2NBQ6ZUU3 175 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 RFPL4BQ6ZWI9 263 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 FAM122BQ7Z309 247 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 PGAM4Q8N0Y7 254 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 ZNF540Q8NDQ6 660 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 C11orf40Q8WZ69 217 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 POM121L2Q96KW2 1035 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 CDRT15Q96T59 188 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 GPA33Q99795 319 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 BEX2Q9BXY8 128 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 LRMDAQ9H2I8 198 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 POLE4Q9NR33 117 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 KCNS2Q9ULS6 477 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 SIGLEC7Q9Y286 467 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 TMEM5Q9Y2B1 443 aa11.99□□□□□ -0.49
VTI1A-206ENST00000489142 UNC119BA6NIH7 251 aa11.98□□□□□ -0.49
VTI1A-206ENST00000489142 XKRYO14609 159 aa11.98□□□□□ -0.49
VTI1A-206ENST00000489142 WNT9BO14905 357 aa11.98□□□□□ -0.49
VTI1A-206ENST00000489142 CDC14BO60729 498 aa11.98□□□□□ -0.49
VTI1A-206ENST00000489142 PTP4A3O75365 173 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms