RNA–Protein interactions for RNA: ENST00000489135.5

TMCO4-205, Transcript of transmembrane and coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene TMCO4, Length 1,150 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4-205ENST00000489135 RRP15Q9Y3B9 282 aaKnown RBP13.1□□□□□ -0.31
TMCO4-205ENST00000489135 ORC6Q9Y5N6 252 aa13.1□□□□□ -0.31
TMCO4-205ENST00000489135 MGRN1O60291 552 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 SCG5P05408 212 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 FOSL1P15407 271 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 NPR2P20594 1047 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 HOXC12P31275 282 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 CDAP32320 146 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 NR1H2P55055 460 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 UBE2NP61088 152 aaKnown RBP13.09□□□□□ -0.31
TMCO4-205ENST00000489135 SLC34A1Q06495 639 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 BSPH1Q075Z2 132 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.09□□□□□ -0.31
TMCO4-205ENST00000489135 CHD3Q12873 2000 aaKnown RBP13.09□□□□□ -0.31
TMCO4-205ENST00000489135 GINS1Q14691 196 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 SLC35F1Q5T1Q4 408 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 ACSM5Q6NUN0 579 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 SLC27A4Q6P1M0 643 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 LEG1Q6P5S2 330 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 ZBTB46Q86UZ6 589 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 OR6V1Q8N148 313 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 SDR9C7Q8NEX9 313 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 OR52E2Q8NGJ4 325 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 SLC29A1Q99808 456 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 C1QTNF6Q9BXI9 259 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 TEX12Q9BXU0 123 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 LIME1Q9H400 295 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 PLEKHF2Q9H8W4 249 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 SIAEQ9HAT2 523 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 RNPEPL1Q9HAU8 725 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 NKX1-2Q9UD57 310 aaPredicted RBP13.09□□□□□ -0.31
TMCO4-205ENST00000489135 EDARQ9UNE0 448 aa13.09□□□□□ -0.31
TMCO4-205ENST00000489135 IGLV1-36A0A0B4J1U3 117 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 IGHV1-18A0A0C4DH31 117 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 SLC16A7O60669 478 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 PLAUP00749 431 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 HLA-HP01893 362 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 MMP7P09237 267 aaPredicted RBP13.08□□□□□ -0.32
TMCO4-205ENST00000489135 CBR1P16152 277 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 CD40P25942 277 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 GRK5P34947 590 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 ZNF83P51522 516 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 RAD23AP54725 363 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 DBPQ10586 325 aaPredicted RBP13.08□□□□□ -0.32
TMCO4-205ENST00000489135 RIPK1Q13546 671 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 PTGES3Q15185 160 aaKnown RBP13.08□□□□□ -0.32
TMCO4-205ENST00000489135 LRRC36Q1X8D7 754 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 PGGHGQ32M88 737 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 FAM27BQ5VT28 67 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 LPCAT4Q643R3 524 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 ALKBH2Q6NS38 261 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 MDP1Q86V88 176 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 MYPOPQ86VE0 399 aaPredicted RBP13.08□□□□□ -0.32
TMCO4-205ENST00000489135 JAZF1Q86VZ6 243 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 CDC20BQ86Y33 519 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 IQCF1Q8N6M8 205 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 SLC37A3Q8NCC5 494 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 LILRB1Q8NHL6 650 aaPredicted RBP13.08□□□□□ -0.32
TMCO4-205ENST00000489135 NINJ1Q92982 152 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 TSSK2Q96PF2 358 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 SH3GL3Q99963 347 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 NMNAT2Q9BZQ4 307 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 ESRP2Q9H6T0 727 aaKnown RBP13.08□□□□□ -0.32
TMCO4-205ENST00000489135 SLC25A19Q9HC21 320 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 C8orf4Q9NR00 106 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 CMC2Q9NRP2 79 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 ST6GALNAC2Q9UJ37 374 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 B9D1Q9UPM9 204 aa13.08□□□□□ -0.32
TMCO4-205ENST00000489135 VPS13CQ709C8 3753 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 CASQ2O14958 399 aaPredicted RBP13.07□□□□□ -0.32
TMCO4-205ENST00000489135 KHDRBS3O75525 346 aaKnown RBP13.07□□□□□ -0.32
TMCO4-205ENST00000489135 UBL3O95164 117 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 RENP00797 406 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 IFNGP01579 166 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 HMGN1P05114 100 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 PATE4P0C8F1 98 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 DNASE1P24855 282 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 PTAFRP25105 342 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 PEX2P28328 305 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 EPHA2P29317 976 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 CRABP1P29762 137 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 NPRL3Q12980 569 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 TMEM236Q5W0B7 351 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 ZNF584Q8IVC4 421 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 GABARAPL3Q9BY60 117 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 RACGAP1Q9H0H5 632 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 CXXC4Q9H2H0 198 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 FN3KQ9H479 309 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 RIBC2Q9H4K1 309 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 SEC61A2Q9H9S3 476 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 MOV10Q9HCE1 1003 aaKnown RBP13.07□□□□□ -0.32
TMCO4-205ENST00000489135 RPRD1BQ9NQG5 326 aaKnown RBP13.07□□□□□ -0.32
TMCO4-205ENST00000489135 POLE4Q9NR33 117 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 KLHL21Q9UJP4 597 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 PLEKHA6Q9Y2H5 1048 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 COA3Q9Y2R0 106 aaPredicted RBP13.07□□□□□ -0.32
TMCO4-205ENST00000489135 FKBP7Q9Y680 259 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 ARFGEF3Q5TH69 2177 aa13.07□□□□□ -0.32
TMCO4-205ENST00000489135 RIIAD1A6NNX1 92 aa13.06□□□□□ -0.32
TMCO4-205ENST00000489135 SHISA9B4DS77 424 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms