RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 B3GAT2Q9NPZ5 323 aa11.34□□□□□ -0.59
TOP3A-206ENST00000489131 TRIM36Q9NQ86 728 aa11.34□□□□□ -0.59
TOP3A-206ENST00000489131 POLE4Q9NR33 117 aa11.34□□□□□ -0.59
TOP3A-206ENST00000489131 RSL24D1Q9UHA3 163 aaKnown RBP11.34□□□□□ -0.59
TOP3A-206ENST00000489131 CYB5R1Q9UHQ9 305 aa11.34□□□□□ -0.59
TOP3A-206ENST00000489131 KLHDC2Q9Y2U9 406 aa11.34□□□□□ -0.59
TOP3A-206ENST00000489131 NOSIPQ9Y314 301 aaKnown RBP11.34□□□□□ -0.59
TOP3A-206ENST00000489131 MBD3L4A6NDZ8 208 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-206ENST00000489131 MBD3L3A6NE82 208 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-206ENST00000489131 MBD3L5A6NJ08 208 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-206ENST00000489131 PRR32B1ATL7 298 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 OGG1O15527 345 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 PLPP2O43688 288 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 WDR1O75083 606 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 MRPL33O75394 65 aaKnown RBP11.33□□□□□ -0.6
TOP3A-206ENST00000489131 LALBAP00709 142 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 ZNF823P16415 610 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 CD36P16671 472 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 AGTR1P30556 359 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 HCCSP53701 268 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 ADAM8P78325 824 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 CTF1Q16619 201 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 TIMM50Q3ZCQ8 353 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 GPR107Q5VW38 600 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 CARD17Q5XLA6 110 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 FDX2Q6P4F2 183 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 CD200R1LQ6Q8B3 271 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 GDPGP1Q6ZNW5 385 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 CLVS1Q8IUQ0 354 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-206ENST00000489131 TUSC5Q8IXB3 177 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 OR6N2Q8NGY6 317 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 MBD3L2Q8NHZ7 208 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-206ENST00000489131 GATAD2BQ8WXI9 593 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 C11orf40Q8WZ69 217 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 RNF166Q96A37 237 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-206ENST00000489131 NABP1Q96AH0 204 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 C4orf36Q96KX1 117 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 OR8B4Q96RC9 309 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 TBX5Q99593 518 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 TTYH2Q9BSA4 534 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 PRRG4Q9BZD6 226 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 ULBP2Q9BZM5 246 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 LAMP5Q9UJQ1 280 aa11.33□□□□□ -0.6
TOP3A-206ENST00000489131 SF3B6Q9Y3B4 125 aaKnown RBP11.33□□□□□ -0.6
TOP3A-206ENST00000489131 ARPC4-TTLL3A0A0A6YYG9 625 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 TMCC2O75069 709 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 ZNF254O75437 659 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 UPK3AO75631 287 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 MPZL1O95297 269 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 CNOT4O95628 575 aaKnown RBP11.32□□□□□ -0.6
TOP3A-206ENST00000489131 GPANK1O95872 356 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 HLA-DQA2P01906 255 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 TACSTD2P09758 323 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 NPR2P20594 1047 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 MSR1P21757 451 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 DCTDP32321 178 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 ZNF84P51523 738 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 OR12D2P58182 307 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 HIST1H3AP68431 136 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 TSTQ16762 297 aaKnown RBP11.32□□□□□ -0.6
TOP3A-206ENST00000489131 EIF2S3LQ2VIR3 472 aaKnown RBP11.32□□□□□ -0.6
TOP3A-206ENST00000489131 HIST2H3PS2Q5TEC6 136 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 FAM27BQ5VT28 67 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 DMKNQ6E0U4 476 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-206ENST00000489131 OR2A2Q6IF42 318 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 KCTD18Q6PI47 426 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-206ENST00000489131 HIST2H3AQ71DI3 136 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 LINGO2Q7L985 606 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 ZNF679Q8IYX0 411 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 GPR137CQ8N3F9 429 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 OR52N5Q8NH56 324 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 SMAP2Q8WU79 429 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-206ENST00000489131 SNX33Q8WV41 574 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 RNF133Q8WVZ7 376 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 NSMAFQ92636 917 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 UFD1Q92890 307 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 PELI1Q96FA3 418 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 ZFP3Q96NJ6 502 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 CNTNAP3BQ96NU0 1288 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 TM9SF2Q99805 663 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 COQ7Q99807 217 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 ABHD6Q9BV23 337 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 CNTNAP3Q9BZ76 1288 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 RERGLQ9H628 205 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 ZNF71Q9NQZ8 489 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-206ENST00000489131 TMEM38BQ9NVV0 291 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 MALT1Q9UDY8 824 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 MRM2Q9UI43 246 aaKnown RBP11.32□□□□□ -0.6
TOP3A-206ENST00000489131 ST6GALNAC2Q9UJ37 374 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 ZNF835Q9Y2P0 537 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 LHFPL6Q9Y693 200 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 USP24Q9UPU5 2620 aa11.32□□□□□ -0.6
TOP3A-206ENST00000489131 METTL15A6NJ78 407 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 H3BMQ9 156 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 CRHP06850 196 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 SPARCP09486 303 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 HSMCR30P0CW71 290 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 PSMA1P25786 263 aaKnown RBP11.31□□□□□ -0.6
TOP3A-206ENST00000489131 GABRA5P31644 462 aa11.31□□□□□ -0.6
TOP3A-206ENST00000489131 OR3A2P47893 321 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms