RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 COL8A2P25067 703 aa19.69■□□□□ 0.74
COL9A3-213ENST00000489045 STOMP27105 288 aa19.69■□□□□ 0.74
COL9A3-213ENST00000489045 RAP1BP61224 184 aa19.69■□□□□ 0.74
COL9A3-213ENST00000489045 RAP1AP62834 184 aa19.69■□□□□ 0.74
COL9A3-213ENST00000489045 FAM27BQ5VT28 67 aa19.69■□□□□ 0.74
COL9A3-213ENST00000489045 AKR7LQ8NHP1 331 aa19.69■□□□□ 0.74
COL9A3-213ENST00000489045 C11orf40Q8WZ69 217 aa19.69■□□□□ 0.74
COL9A3-213ENST00000489045 RDH5Q92781 318 aa19.69■□□□□ 0.74
COL9A3-213ENST00000489045 HPS1Q92902 700 aa19.69■□□□□ 0.74
COL9A3-213ENST00000489045 NMNAT1Q9HAN9 279 aaPredicted RBP19.69■□□□□ 0.74
COL9A3-213ENST00000489045 EGFL7Q9UHF1 273 aa19.69■□□□□ 0.74
COL9A3-213ENST00000489045 RPS6KA6Q9UK32 745 aa19.69■□□□□ 0.74
COL9A3-213ENST00000489045 A0A1W2PPL8 197 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 RNF212BA8MTL3 300 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 ATP8B1O43520 1251 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 ACHEP22303 614 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 LAP3P28838 519 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 MAGEB1P43366 347 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 PSG4Q00888 419 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 CCNIQ14094 377 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 FOXL2NBQ6ZUU3 175 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 TMPRSS11FQ6ZWK6 438 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 OR1J1Q8NGS3 322 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 SLC7A13Q8TCU3 470 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 SNX33Q8WV41 574 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 YIPF5Q969M3 257 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 POM121L2Q96KW2 1035 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 ANKRD19PQ9H560 264 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 SPAG4Q9NPE6 437 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 HINT3Q9NQE9 182 aaKnown RBP19.68■□□□□ 0.74
COL9A3-213ENST00000489045 GPR160Q9UJ42 338 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 ADAM18Q9Y3Q7 739 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 STAB1Q9NY15 2570 aa19.68■□□□□ 0.74
COL9A3-213ENST00000489045 LOC100509620A0A075B734 347 aa19.67■□□□□ 0.74
COL9A3-213ENST00000489045 C5orf49A4QMS7 147 aa19.67■□□□□ 0.74
COL9A3-213ENST00000489045 C17orf100A8MU93 164 aa19.67■□□□□ 0.74
COL9A3-213ENST00000489045 H7C1C5 153 aa19.67■□□□□ 0.74
COL9A3-213ENST00000489045 CST2P09228 141 aa19.67■□□□□ 0.74
COL9A3-213ENST00000489045 SRD5A1P18405 259 aa19.67■□□□□ 0.74
COL9A3-213ENST00000489045 HNF1AP20823 631 aa19.67■□□□□ 0.74
COL9A3-213ENST00000489045 PRDX6P30041 224 aa19.67■□□□□ 0.74
COL9A3-213ENST00000489045 RPL4P36578 427 aaKnown RBP19.67■□□□□ 0.74
COL9A3-213ENST00000489045 WNT5AP41221 380 aa19.67■□□□□ 0.74
COL9A3-213ENST00000489045 GPR6P46095 362 aaPredicted RBP19.67■□□□□ 0.74
COL9A3-213ENST00000489045 LCN6P62502 163 aa19.67■□□□□ 0.74
COL9A3-213ENST00000489045 ZBED5Q49AG3 693 aa19.67■□□□□ 0.74
COL9A3-213ENST00000489045 RRM2BQ7LG56 351 aa19.67■□□□□ 0.74
COL9A3-213ENST00000489045 FAM156AQ8NDB6 213 aa19.67■□□□□ 0.74
COL9A3-213ENST00000489045 SPATA3Q8NHX4 192 aa19.67■□□□□ 0.74
COL9A3-213ENST00000489045 FAM46AQ96IP4 442 aaKnown RBP19.67■□□□□ 0.74
COL9A3-213ENST00000489045 OR2H1Q9GZK4 316 aa19.67■□□□□ 0.74
COL9A3-213ENST00000489045 WNT5BQ9H1J7 359 aa19.67■□□□□ 0.74
COL9A3-213ENST00000489045 ZNF275Q9NSD4 429 aaPredicted RBP19.67■□□□□ 0.74
COL9A3-213ENST00000489045 SLCO1C1Q9NYB5 712 aa19.67■□□□□ 0.74
COL9A3-213ENST00000489045 TMEM5Q9Y2B1 443 aa19.67■□□□□ 0.74
COL9A3-213ENST00000489045 PHF1O43189 567 aaPredicted RBP19.66■□□□□ 0.74
COL9A3-213ENST00000489045 ZNF26P17031 533 aaPredicted RBP19.66■□□□□ 0.74
COL9A3-213ENST00000489045 GUCA1AP43080 201 aaPredicted RBP19.66■□□□□ 0.74
COL9A3-213ENST00000489045 GDI2P50395 445 aaKnown RBP19.66■□□□□ 0.74
COL9A3-213ENST00000489045 MRPS11P82912 194 aaKnown RBP19.66■□□□□ 0.74
COL9A3-213ENST00000489045 GLO1Q04760 184 aa19.66■□□□□ 0.74
COL9A3-213ENST00000489045 GLYATQ6IB77 296 aa19.66■□□□□ 0.74
COL9A3-213ENST00000489045 TMEM154Q6P9G4 183 aa19.66■□□□□ 0.74
COL9A3-213ENST00000489045 ZNF101Q8IZC7 436 aa19.66■□□□□ 0.74
COL9A3-213ENST00000489045 LINC01356Q8N9X3 169 aa19.66■□□□□ 0.74
COL9A3-213ENST00000489045 NARFLQ9H6Q4 476 aa19.66■□□□□ 0.74
COL9A3-213ENST00000489045 ADA2Q9NZK5 511 aa19.66■□□□□ 0.74
COL9A3-213ENST00000489045 GRHPRQ9UBQ7 328 aa19.66■□□□□ 0.74
COL9A3-213ENST00000489045 SNX3O60493 162 aa19.65■□□□□ 0.74
COL9A3-213ENST00000489045 H1F0P07305 194 aaKnown RBP19.65■□□□□ 0.74
COL9A3-213ENST00000489045 CD14P08571 375 aa19.65■□□□□ 0.74
COL9A3-213ENST00000489045 DRD4P21917 467 aa19.65■□□□□ 0.74
COL9A3-213ENST00000489045 CDH15P55291 814 aa19.65■□□□□ 0.74
COL9A3-213ENST00000489045 ENDOGQ14249 297 aaKnown RBP19.65■□□□□ 0.74
COL9A3-213ENST00000489045 CR1LQ2VPA4 569 aa19.65■□□□□ 0.74
COL9A3-213ENST00000489045 MESTQ5EB52 335 aa19.65■□□□□ 0.74
COL9A3-213ENST00000489045 FGD3Q5JSP0 725 aa19.65■□□□□ 0.74
COL9A3-213ENST00000489045 SPATA46Q5T0L3 261 aa19.65■□□□□ 0.74
COL9A3-213ENST00000489045 RNF148Q8N7C7 305 aa19.65■□□□□ 0.74
COL9A3-213ENST00000489045 FAM86B1Q8N7N1 296 aa19.65■□□□□ 0.74
COL9A3-213ENST00000489045 GTF3AQ92664 365 aaKnown RBP19.65■□□□□ 0.74
COL9A3-213ENST00000489045 C1orf159Q96HA4 380 aa19.65■□□□□ 0.74
COL9A3-213ENST00000489045 Q96M85 177 aa19.65■□□□□ 0.74
COL9A3-213ENST00000489045 ZNF416Q9BWM5 594 aa19.65■□□□□ 0.74
COL9A3-213ENST00000489045 NSRP1Q9H0G5 558 aaKnown RBP19.65■□□□□ 0.74
COL9A3-213ENST00000489045 DCAF13Q9NV06 445 aaKnown RBP19.65■□□□□ 0.74
COL9A3-213ENST00000489045 NDUFAF4Q9P032 175 aa19.65■□□□□ 0.74
COL9A3-213ENST00000489045 EIF3KQ9UBQ5 218 aaKnown RBP19.65■□□□□ 0.74
COL9A3-213ENST00000489045 SAMD4AQ9UPU9 718 aaKnown RBP19.65■□□□□ 0.74
COL9A3-213ENST00000489045 FAM32AQ9Y421 112 aaKnown RBP19.65■□□□□ 0.74
COL9A3-213ENST00000489045 TIMM10BQ9Y5J6 103 aa19.65■□□□□ 0.74
COL9A3-213ENST00000489045 A0A1W2PRQ8 180 aa19.64■□□□□ 0.73
COL9A3-213ENST00000489045 RP2O75695 350 aa19.64■□□□□ 0.73
COL9A3-213ENST00000489045 IGHV3-13P01766 116 aa19.64■□□□□ 0.73
COL9A3-213ENST00000489045 MSR1P21757 451 aa19.64■□□□□ 0.73
COL9A3-213ENST00000489045 PCBD1P61457 104 aa19.64■□□□□ 0.73
COL9A3-213ENST00000489045 CCL8P80075 99 aa19.64■□□□□ 0.73
COL9A3-213ENST00000489045 DGCR6Q14129 220 aa19.64■□□□□ 0.73
COL9A3-213ENST00000489045 ZNF774Q6NX45 483 aa19.64■□□□□ 0.73
COL9A3-213ENST00000489045 FAM122BQ7Z309 247 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms