RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 PTDSS1P48651 473 aaKnown RBP9.02□□□□□ -0.97
SKA1-204ENST00000488454 BLVRAP53004 296 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 MRPS34P82930 218 aaKnown RBP9.02□□□□□ -0.97
SKA1-204ENST00000488454 ETFDHQ16134 617 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 TBRG1Q3YBR2 411 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 SLC36A2Q495M3 483 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 NRN1LQ496H8 165 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 HIKESHIQ53FT3 197 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 KLHL12Q53G59 568 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 SP5Q6BEB4 398 aaPredicted RBP9.02□□□□□ -0.97
SKA1-204ENST00000488454 PLBD1Q6P4A8 553 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 MEX3BQ6ZN04 569 aaKnown RBP9.02□□□□□ -0.97
SKA1-204ENST00000488454 ZNF627Q7L945 461 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 CXXC5Q7LFL8 322 aaKnown RBP9.02□□□□□ -0.97
SKA1-204ENST00000488454 SLC16A14Q7RTX9 510 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 DPPA2Q7Z7J5 298 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 ZBTB46Q86UZ6 589 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 CPOQ8IVL8 374 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 TCEANCQ8N8B7 351 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 OR10H5Q8NGA6 315 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 OR8J1Q8NGP2 316 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 OR9Q1Q8NGQ5 310 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 OR52N5Q8NH56 324 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 LINC01560Q8TB33 94 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 FAM81AQ8TBF8 368 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 NRG4Q8WWG1 115 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 ZC3HAV1LQ96H79 300 aaKnown RBP9.02□□□□□ -0.97
SKA1-204ENST00000488454 DACH2Q96NX9 599 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 WFIKKN1Q96NZ8 548 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 TSSK2Q96PF2 358 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 IL4I1Q96RQ9 567 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 MBOAT4Q96T53 435 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 DDOQ99489 341 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 APOL4Q9BPW4 351 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 CDADC1Q9BWV3 514 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 RACGAP1Q9H0H5 632 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 FN3KQ9H479 309 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 RNF121Q9H920 327 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 MOV10Q9HCE1 1003 aaKnown RBP9.02□□□□□ -0.97
SKA1-204ENST00000488454 NGBQ9NPG2 151 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 SLC17A5Q9NRA2 495 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 ZNF226Q9NYT6 803 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 MOKQ9UQ07 419 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 AMDHD2Q9Y303 409 aa9.02□□□□□ -0.97
SKA1-204ENST00000488454 INTS1Q8N201 2190 aaKnown RBP9.02□□□□□ -0.97
SKA1-204ENST00000488454 NCOA6Q14686 2063 aaPredicted RBP9.01□□□□□ -0.97
SKA1-204ENST00000488454 C12orf71A8MTZ7 269 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 H0YJX3 145 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 C19orf84I3L1E1 186 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 SLC16A6O15403 523 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 PRKYO43930 277 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 MPZL2O60487 215 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 TMCC2O75069 709 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 UBL3O95164 117 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 CLDN1O95832 211 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 ZNF823P16415 610 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 SPI1P17947 270 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 MSR1P21757 451 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 FMO3P31513 532 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 PYCR1P32322 319 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 PCBD1P61457 104 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 RPS7P62081 194 aaKnown RBP9.01□□□□□ -0.97
SKA1-204ENST00000488454 SNTB1Q13884 538 aaKnown RBP9.01□□□□□ -0.97
SKA1-204ENST00000488454 KEAP1Q14145 624 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 PPA1Q15181 289 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 SNCBQ16143 134 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 FAM27BQ5VT28 67 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 FBXW10Q5XX13 1052 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 TMEM53Q6P2H8 277 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.01□□□□□ -0.97
SKA1-204ENST00000488454 WFDC8Q8IUA0 241 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 DMRTC2Q8IXT2 367 aaPredicted RBP9.01□□□□□ -0.97
SKA1-204ENST00000488454 LRRC18Q8N456 261 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 OR6K6Q8NGW6 343 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 TMEM163Q8TC26 289 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 FAM222BQ8WU58 562 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 PTP4A1Q93096 173 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 BOD1Q96IK1 185 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 FOXN4Q96NZ1 517 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 SH3GL3Q99963 347 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 SPOCK3Q9BQ16 436 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 NELFAQ9H3P2 528 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 MED20Q9H944 212 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 CCNB1IP1Q9NPC3 277 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 POLE4Q9NR33 117 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 NDRG4Q9ULP0 352 aaKnown RBP9.01□□□□□ -0.97
SKA1-204ENST00000488454 POLR1DQ9Y2S0 133 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 UGT2A1Q9Y4X1 527 aa9.01□□□□□ -0.97
SKA1-204ENST00000488454 UBR5O95071 2799 aaPredicted RBP9.01□□□□□ -0.97
SKA1-204ENST00000488454 ARPC4-TTLL3A0A0A6YYG9 625 aa9□□□□□ -0.97
SKA1-204ENST00000488454 IGLV1-36A0A0B4J1U3 117 aa9□□□□□ -0.97
SKA1-204ENST00000488454 A0A1W2PR80 420 aa9□□□□□ -0.97
SKA1-204ENST00000488454 SNTNA6NMZ2 147 aa9□□□□□ -0.97
SKA1-204ENST00000488454 H0YAE9 185 aa9□□□□□ -0.97
SKA1-204ENST00000488454 DCTN6O00399 190 aa9□□□□□ -0.97
SKA1-204ENST00000488454 GLCEO94923 617 aa9□□□□□ -0.97
SKA1-204ENST00000488454 GYPBP06028 91 aa9□□□□□ -0.97
SKA1-204ENST00000488454 CLUP10909 449 aa9□□□□□ -0.97
SKA1-204ENST00000488454 COX6B1P14854 86 aa9□□□□□ -0.97
SKA1-204ENST00000488454 GSTT1P30711 240 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms