RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 BGLAPP02818 100 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 RPSAP08865 295 aaKnown RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 HOXB9P17482 250 aaPredicted RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 MATN1P21941 496 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC9A3P48764 834 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF84P51523 738 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 CRISP3P54108 245 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 RAD23AP54725 363 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 WNT3P56703 355 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 OR2B6P58173 313 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 LOXL3P58215 753 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 LSM6P62312 80 aaKnown RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 HIST1H3AP68431 136 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 KCNJ10P78508 379 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 BST1Q10588 318 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF154Q13106 437 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 CASP8Q14790 479 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 GSG1Q2KHT4 349 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 C18orf21Q32NC0 220 aaPredicted RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 IQCCQ4KMZ1 466 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 MIDNQ504T8 468 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 OTUD3Q5T2D3 398 aaPredicted RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 HIST2H3PS2Q5TEC6 136 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 C1orf140Q5VVS0 124 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 C8orf74Q6P047 294 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 LEG1Q6P5S2 330 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 C16orf87Q6PH81 154 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 BTNL3Q6UXE8 466 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 CASP12Q6UXS9 341 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 FBXW12Q6X9E4 464 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 DCDC5Q6ZRR9 648 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 HIST2H3AQ71DI3 136 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 RHOUQ7L0Q8 258 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 SPATA21Q7Z572 469 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 EGFL6Q8IUX8 553 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 PRR22Q8IZ63 422 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC35F6Q8N357 371 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 FAM71E2Q8N5Q1 922 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 WFDC9Q8NEX5 89 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 C11orf40Q8WZ69 217 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 NPIPB3Q92617 1050 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 EXOSC8Q96B26 276 aaKnown RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 OR5B2Q96R09 309 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF300Q96RE9 604 aaPredicted RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 PAFAH2Q99487 392 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ARHGDIGQ99819 225 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 THUMPD3Q9BV44 507 aaKnown RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 PTDSS2Q9BVG9 487 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 DPCDQ9BVM2 203 aaPredicted RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 TRIM15Q9C019 465 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 KCNN2Q9H2S1 579 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 GHITMQ9H3K2 345 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 RMND5AQ9H871 391 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 LIN28AQ9H9Z2 209 aaKnown RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 SAP30LQ9HAJ7 183 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC7A10Q9NS82 523 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 FARSBQ9NSD9 589 aaKnown RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ZCCHC3Q9NUD5 404 aaKnown RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 SH3BP4Q9P0V3 963 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF391Q9UJN7 358 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 POU2F3Q9UKI9 436 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 SLC7A7Q9UM01 511 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 NSD1Q96L73 2696 aaPredicted RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 SEC16AO15027 2179 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ATMQ13315 3056 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ANKHD1Q8IWZ3 2542 aaKnown RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 LAMA1P25391 3075 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 IGHV1-69-2A0A0G2JMI3 117 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 A0A0G2JN53 185 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 hCG_1807616A0A1W2PRN6 198 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 E9PQ18 207 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 SCN2BO60939 215 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 CRCPO75575 148 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 TGDSO95455 350 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 OR8G3PP0DMU2 310 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 BCKDHAP12694 445 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 GCSHP23434 173 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 FPR3P25089 353 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ACAA2P42765 397 aaKnown RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 KIR2DS4P43632 304 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 SRP9P49458 86 aaKnown RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF83P51522 516 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 RAG2P55895 527 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 EMX1Q04741 257 aaPredicted RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 PIGFQ07326 219 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 EGFEM1PQ0D2K5 195 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ZNF718Q3SXZ3 478 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 SPATS1Q496A3 300 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ATP6AP1LQ52LC2 224 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 KLHL22Q53GT1 634 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ARMCX4Q5H9R4 360 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 LRIF1Q5T3J3 769 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 DCAF12L2Q5VW00 463 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 TEX36Q5VZQ5 186 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 DGAT2L7PQ6IED9 249 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ULK3Q6PHR2 472 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 C17orf53Q8N3J3 647 aaPredicted RBP2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 MREGQ8N565 214 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 COMMD1Q8N668 190 aa2.29□□□□□ -2.04
DEPDC1-203ENST00000488146 ZSCAN4Q8NAM6 433 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms