RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 OR4F3Q6IEY1 312 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 KRTAP5-10Q6L8G5 202 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 ARL9Q6T311 187 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 HDDC2Q7Z4H3 204 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 OR2T3Q8NH03 318 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 FAM110BQ8TC76 370 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 LKAAEAR1Q8TD35 194 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 MAIP1Q8WWC4 291 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 ZNF488Q96MN9 340 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 SLC38A2Q96QD8 506 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 CLCC1Q96S66 551 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 RARRES2Q99969 163 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 RIBC2Q9H4K1 309 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 NIPAL2Q9H841 368 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 RMND5AQ9H871 391 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 CTSFQ9UBX1 484 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 KIF16BQ96L93 1317 aa1.14□□□□□ -2.23
SMC4-219ENST00000487747 TMEM120BA0PK00 339 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 C5orf63A6NC05 138 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 H0YJW9 148 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 K7EQM0 130 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 POLR2DO15514 142 aaKnown RBP1.13□□□□□ -2.23
SMC4-219ENST00000487747 MGRN1O60291 552 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 TOM1O60784 492 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 PEX11AO75192 247 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 IGHV2-5P01817 119 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 UGT2B4P06133 528 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 HEXBP07686 556 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 HSMCR30P0CW71 290 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 FDFT1P37268 417 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 RORCP51449 518 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 FAM53BQ14153 422 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 ZSCAN26Q16670 478 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 SLC25A24Q6NUK1 477 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 GUSBP11Q6P575 273 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 PLET1Q6UQ28 207 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 NUDCD3Q8IVD9 361 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 CEP112Q8N8E3 955 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 SPANXA2-OT1Q8N9U9 137 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 APCDD1LQ8NCL9 501 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 SHC3Q92529 594 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 CXorf40BQ96DE9 158 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 C16orf45Q96MC5 204 aaPredicted RBP1.13□□□□□ -2.23
SMC4-219ENST00000487747 ZNF607Q96SK3 696 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 OR52D1Q9H346 318 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 RPF2Q9H7B2 306 aaKnown RBP1.13□□□□□ -2.23
SMC4-219ENST00000487747 TMOD2Q9NZR1 351 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 ZNF639Q9UID6 485 aa1.13□□□□□ -2.23
SMC4-219ENST00000487747 COL22A1Q8NFW1 1626 aaPredicted RBP1.12□□□□□ -2.23
SMC4-219ENST00000487747 TRAV26-1A0A087WT03 109 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 SPECC1L-ADORA2AF8WAN1 911 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 FCMRO60667 390 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 SCGNO76038 276 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 OR7A10O76100 309 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 CLDN9O95484 217 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 VHLP40337 213 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 CCT3P49368 545 aaKnown RBP1.12□□□□□ -2.23
SMC4-219ENST00000487747 FUT5Q11128 374 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 KCTD21Q4G0X4 260 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 SPECC1LQ69YQ0 1117 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 ENPP6Q6UWR7 440 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 CASP12Q6UXS9 341 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 TEX43Q6ZNM6 134 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 Q6ZPB1 254 aaPredicted RBP1.12□□□□□ -2.23
SMC4-219ENST00000487747 SLC16A13Q7RTY0 426 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 DHDDSQ86SQ9 333 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 WDFY1Q8IWB7 410 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 OR6N1Q8NGY5 312 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 KLF14Q8TD94 323 aaPredicted RBP1.12□□□□□ -2.23
SMC4-219ENST00000487747 TMEM54Q969K7 222 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 FAM3DQ96BQ1 224 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 BFARQ9NZS9 450 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 UVRAGQ9P2Y5 699 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 MRPS7Q9Y2R9 242 aaKnown RBP1.12□□□□□ -2.23
SMC4-219ENST00000487747 CDHR2Q9BYE9 1310 aa1.12□□□□□ -2.23
SMC4-219ENST00000487747 PRR14LQ5THK1 2151 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 TRAV39A0A0B4J263 110 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 BTNL10A8MVZ5 291 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 SNNO75324 88 aaPredicted RBP1.11□□□□□ -2.23
SMC4-219ENST00000487747 PRB1P04280 392 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 MAS1LP35410 378 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 OGDHQ02218 1023 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 ZNF77Q15935 545 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 EXOC3L2Q2M3D2 409 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 PDZK1Q5T2W1 519 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 OR2A2Q6IF42 318 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 SLC25A48Q6ZT89 311 aaKnown RBP1.11□□□□□ -2.23
SMC4-219ENST00000487747 ASCL5Q7RTU5 278 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 PEX26Q7Z412 305 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 FAM83FQ8NEG4 500 aaPredicted RBP1.11□□□□□ -2.23
SMC4-219ENST00000487747 STEAP2Q8NFT2 490 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 THRSPQ92748 146 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 ZNF317Q96PQ6 595 aaPredicted RBP1.11□□□□□ -2.23
SMC4-219ENST00000487747 PSKH2Q96QS6 385 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 OR8B4Q96RC9 309 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 SORT1Q99523 831 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 SH3GL3Q99963 347 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 KCTD14Q9BQ13 255 aaPredicted RBP1.11□□□□□ -2.23
SMC4-219ENST00000487747 TBL1YQ9BQ87 522 aa1.11□□□□□ -2.23
SMC4-219ENST00000487747 TMEM59Q9BXS4 323 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms