RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 SYT4Q9H2B2 425 aa8.86□□□□□ -0.99
NEK4-204ENST00000487068 C1orf198Q9H425 327 aa8.86□□□□□ -0.99
NEK4-204ENST00000487068 EGLN3Q9H6Z9 239 aa8.86□□□□□ -0.99
NEK4-204ENST00000487068 YY1AP1Q9H869 796 aa8.86□□□□□ -0.99
NEK4-204ENST00000487068 DYNLRB1Q9NP97 96 aa8.86□□□□□ -0.99
NEK4-204ENST00000487068 NRIP3Q9NQ35 241 aa8.86□□□□□ -0.99
NEK4-204ENST00000487068 B3GNT2Q9NY97 397 aa8.86□□□□□ -0.99
NEK4-204ENST00000487068 ZNF224Q9NZL3 707 aa8.86□□□□□ -0.99
NEK4-204ENST00000487068 KIF17Q9P2E2 1029 aa8.86□□□□□ -0.99
NEK4-204ENST00000487068 POMPQ9Y244 141 aa8.86□□□□□ -0.99
NEK4-204ENST00000487068 PMF1-BGLAPU3KQ54 211 aa8.86□□□□□ -0.99
NEK4-204ENST00000487068 RTTNQ86VV8 2226 aa8.86□□□□□ -0.99
NEK4-204ENST00000487068 SLC22A23A1A5C7 686 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 GSC2O15499 205 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 SLC16A7O60669 478 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 SOX14O95416 240 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 HLA-DQA2P01906 255 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 FAM157BP0CG42 384 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 FOSL1P15407 271 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 ZNF32P17041 273 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 LAP3P28838 519 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 GSSP48637 474 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 FXYD6P3P58550 94 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 RPS23P62266 143 aaKnown RBP8.85□□□□□ -0.99
NEK4-204ENST00000487068 CBX1P83916 185 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 RAB35Q15286 201 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 NRN1LQ496H8 165 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 C1orf146Q5VVC0 180 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 C1orf94Q6P1W5 598 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 SLC25A47Q6Q0C1 308 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 CCDC121Q6ZUS5 278 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 SDR9C7Q8NEX9 313 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 OR10G2Q8NGC3 310 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 OR4K13Q8NH42 304 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 FGFBP3Q8TAT2 258 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 VRK1Q99986 396 aaPredicted RBP8.85□□□□□ -0.99
NEK4-204ENST00000487068 CADM1Q9BY67 442 aaKnown RBP8.85□□□□□ -0.99
NEK4-204ENST00000487068 LRMDAQ9H2I8 198 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 SIAEQ9HAT2 523 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 DLL4Q9NR61 685 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 VNN3Q9NY84 501 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 SLC7A8Q9UHI5 535 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 UGT2A1Q9Y4X1 527 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 CDH10Q9Y6N8 788 aa8.85□□□□□ -0.99
NEK4-204ENST00000487068 DNHD1Q96M86 4753 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 C12orf71A8MTZ7 269 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 H3BN98 237 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 SMAD7O15105 426 aaKnown RBP8.84□□□□□ -0.99
NEK4-204ENST00000487068 SSX4O60224 188 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 DOK2O60496 412 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 FKBP6O75344 327 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 PTP4A3O75365 173 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 KHDRBS3O75525 346 aaKnown RBP8.84□□□□□ -0.99
NEK4-204ENST00000487068 SERPINA5P05154 406 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 LCKP06239 509 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 ERCC1P07992 297 aaPredicted RBP8.84□□□□□ -0.99
NEK4-204ENST00000487068 OR4A8P0C604 315 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 CCL2P13500 99 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 CTLA4P16410 223 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 HOXB6P17509 224 aaKnown RBP8.84□□□□□ -0.99
NEK4-204ENST00000487068 GSTM3P21266 225 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 APEX1P27695 318 aaKnown RBP8.84□□□□□ -0.99
NEK4-204ENST00000487068 CRABP1P29762 137 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 THBS4P35443 961 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 SERPINF1P36955 418 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 ARHGDIAP52565 204 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 ZNF133P52736 654 aaPredicted RBP8.84□□□□□ -0.99
NEK4-204ENST00000487068 PCBD1P61457 104 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 ETFDHQ16134 617 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 MICAQ29983 383 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 CLEC12BQ2HXU8 276 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 RFX4Q33E94 735 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 PABPC1L2AQ5JQF8 200 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 SLC35F1Q5T1Q4 408 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 PTCHD4Q6ZW05 846 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 ALDH16A1Q8IZ83 802 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 SVOPLQ8N434 492 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 NUP37Q8NFH4 326 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 OR4C15Q8NGM1 316 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 OR1J2Q8NGS2 313 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 AKR7LQ8NHP1 331 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 TEX47Q8TBZ9 253 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 GIPC3Q8TF64 312 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 NABP1Q96AH0 204 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 NMD3Q96D46 503 aaKnown RBP8.84□□□□□ -0.99
NEK4-204ENST00000487068 NMNAT3Q96T66 252 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 NUAK2Q9H093 628 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 FN3KQ9H479 309 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 ZNF556Q9HAH1 456 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 BARX1Q9HBU1 254 aaPredicted RBP8.84□□□□□ -0.99
NEK4-204ENST00000487068 EMC7Q9NPA0 242 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 RPRD1BQ9NQG5 326 aaKnown RBP8.84□□□□□ -0.99
NEK4-204ENST00000487068 ZNF701Q9NV72 531 aaPredicted RBP8.84□□□□□ -0.99
NEK4-204ENST00000487068 GDF2Q9UK05 429 aaPredicted RBP8.84□□□□□ -0.99
NEK4-204ENST00000487068 CMAHPQ9Y471 501 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 FKBP7Q9Y680 259 aa8.84□□□□□ -0.99
NEK4-204ENST00000487068 NIPBLQ6KC79 2804 aaeCLIP8.84□□□□□ -0.99
NEK4-204ENST00000487068 A0A1W2PPW3 197 aa8.83□□□□□ -1
NEK4-204ENST00000487068 C5orf49A4QMS7 147 aa8.83□□□□□ -1
NEK4-204ENST00000487068 OVOL3O00110 214 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms