RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 TRAPPC6AO75865 159 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 ZFPL1O95159 310 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 ACTL6AO96019 429 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 OPN1LWP04000 364 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 SPARCP09486 303 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 TCEA1P23193 301 aaKnown RBP10.34□□□□□ -0.75
PRKCB-207ENST00000486868 CALRP27797 417 aaKnown RBP10.34□□□□□ -0.75
PRKCB-207ENST00000486868 PSMB10P40306 273 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 CSNK1A1P48729 337 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 PSMD7P51665 324 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 CLDN17P56750 224 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 NANOS3P60323 173 aaKnown RBP10.34□□□□□ -0.75
PRKCB-207ENST00000486868 MXD1Q05195 221 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 RIN1Q13671 783 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 EIF2B1Q14232 305 aaKnown RBP10.34□□□□□ -0.75
PRKCB-207ENST00000486868 TGIF1Q15583 401 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 Q499Y3 187 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 HSD17B12Q53GQ0 312 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 WIPI1Q5MNZ9 446 aaPredicted RBP10.34□□□□□ -0.75
PRKCB-207ENST00000486868 KRT77Q7Z794 578 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 SLC22A16Q86VW1 577 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 WDFY1Q8IWB7 410 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 TMEM123Q8N131 208 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 PARP16Q8N5Y8 322 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 ZIC4Q8N9L1 334 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 GPR148Q8TDV2 347 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 C11orf40Q8WZ69 217 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 TMEM45BQ96B21 275 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 OR2M2Q96R28 347 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 ATF6BQ99941 703 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 KCNS3Q9BQ31 491 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 SOSTQ9BQB4 213 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 WACQ9BTA9 647 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 EMC6Q9BV81 110 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 TPK1Q9H3S4 243 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 C1orf198Q9H425 327 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 ABRACLQ9P1F3 81 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 RABL2AQ9UBK7 228 aaPredicted RBP10.34□□□□□ -0.75
PRKCB-207ENST00000486868 FOXD3Q9UJU5 478 aaPredicted RBP10.34□□□□□ -0.75
PRKCB-207ENST00000486868 RABL2BQ9UNT1 228 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 R4GMQ9 66 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 CPAMD8Q8IZJ3 1885 aa10.34□□□□□ -0.75
PRKCB-207ENST00000486868 IGKV3D-15A0A087WSY6 115 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 TRBV5-7A0A0A0MS05 114 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 A0A0G2JK05 382 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 ACOD1A6NK06 481 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 ZNF716A6NP11 495 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 J3QRK9 145 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 EIF1AYO14602 144 aaKnown RBP10.33□□□□□ -0.76
PRKCB-207ENST00000486868 MAGEB4O15481 346 aaPredicted RBP10.33□□□□□ -0.76
PRKCB-207ENST00000486868 RAMP1O60894 148 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 SRSF10O75494 262 aaKnown RBP10.33□□□□□ -0.76
PRKCB-207ENST00000486868 UPK1BO75841 260 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 CEACAM4O75871 244 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 ISG15P05161 165 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 QDPRP09417 244 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 PSKH1P11801 424 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 ZNF708P17019 499 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 RAB3BP20337 219 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 CTSSP25774 331 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 CFPP27918 469 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 GUCA1AP43080 201 aaPredicted RBP10.33□□□□□ -0.76
PRKCB-207ENST00000486868 LHX2P50458 406 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 MMP16P51512 607 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 CLDN20P56880 219 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 FMODQ06828 376 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 CAMK2DQ13557 499 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 RIPPLY2Q5TAB7 128 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 LRFN4Q6PJG9 635 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 ZNF704Q6ZNC4 412 aaPredicted RBP10.33□□□□□ -0.76
PRKCB-207ENST00000486868 LINC00696Q6ZRV3 163 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 ASCL5Q7RTU5 278 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 CATSPERDQ86XM0 798 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 C20orf196Q8IYI0 205 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 FAM109AQ8N4B1 249 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 MEIOBQ8N635 442 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 TMEM251Q8N6I4 163 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 GDPD1Q8N9F7 314 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 OR10D3Q8NH80 312 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 CHPT1Q8WUD6 406 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 DERL3Q96Q80 235 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 PDCD1LG2Q9BQ51 273 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 SRXN1Q9BYN0 137 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 PPIL3Q9H2H8 161 aaKnown RBP10.33□□□□□ -0.76
PRKCB-207ENST00000486868 POLE4Q9NR33 117 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 FLVCR1Q9Y5Y0 555 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 VPS13AQ96RL7 3174 aa10.33□□□□□ -0.76
PRKCB-207ENST00000486868 EP300Q09472 2414 aaPredicted RBP10.33□□□□□ -0.76
PRKCB-207ENST00000486868 OR6C65A6NJZ3 312 aa10.32□□□□□ -0.76
PRKCB-207ENST00000486868 ACOT7O00154 380 aa10.32□□□□□ -0.76
PRKCB-207ENST00000486868 NKX2-8O15522 239 aa10.32□□□□□ -0.76
PRKCB-207ENST00000486868 RGS5O15539 181 aa10.32□□□□□ -0.76
PRKCB-207ENST00000486868 DHHO43323 396 aa10.32□□□□□ -0.76
PRKCB-207ENST00000486868 SLC43A1O75387 559 aa10.32□□□□□ -0.76
PRKCB-207ENST00000486868 RPP14O95059 124 aaKnown RBP10.32□□□□□ -0.76
PRKCB-207ENST00000486868 GPANK1O95872 356 aa10.32□□□□□ -0.76
PRKCB-207ENST00000486868 SRMP19623 302 aa10.32□□□□□ -0.76
PRKCB-207ENST00000486868 SDHBP21912 280 aa10.32□□□□□ -0.76
PRKCB-207ENST00000486868 MEOX1P50221 254 aa10.32□□□□□ -0.76
PRKCB-207ENST00000486868 TNFSF10P50591 281 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms