RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 DNM1P34Q6PK57 102 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 UGT2A3Q6UWM9 527 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 FOXL2NBQ6ZUU3 175 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 GLB1L2Q8IW92 636 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 ZNF433Q8N7K0 673 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-229ENST00000486665 C11orf40Q8WZ69 217 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 KISS1RQ969F8 398 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-229ENST00000486665 NABP1Q96AH0 204 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 ZMYND19Q96E35 227 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-229ENST00000486665 RACGAP1Q9H0H5 632 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 SEC61A2Q9H9S3 476 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 MRPL22Q9NWU5 206 aaKnown RBP11.21□□□□□ -0.61
HDAC6-229ENST00000486665 CLN6Q9NWW5 311 aa11.21□□□□□ -0.61
HDAC6-229ENST00000486665 H2AFY2Q9P0M6 372 aaPredicted RBP11.21□□□□□ -0.61
HDAC6-229ENST00000486665 FREM1Q5H8C1 2179 aa11.21□□□□□ -0.62
HDAC6-229ENST00000486665 A0A096LPE4 126 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 A0A1W2PPL8 197 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 A0A1W2PPZ6 126 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 NKX2-6A6NCS4 301 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 ZNF99A8MXY4 864 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-229ENST00000486665 PRODHO43272 600 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 LYZL6O75951 148 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 NR2C1P13056 603 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 COX5AP20674 150 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 GSTT1P30711 240 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 HTR1FP30939 366 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 FMO3P31513 532 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 ZNF84P51523 738 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 NUDT6P53370 316 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 CDH11P55287 796 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 RIPPLY3P57055 190 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 P2RY6Q15077 328 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 STK11Q15831 433 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 GABRA6Q16445 453 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 MEP1BQ16820 701 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 SLC25A35Q3KQZ1 300 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 SLC35D3Q5M8T2 416 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 SFRP5Q5T4F7 317 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 MEDAGQ5VYS4 303 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 STAC2Q6ZMT1 411 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 ABHD12BQ7Z5M8 362 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-229ENST00000486665 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-229ENST00000486665 OR1K1Q8NGR3 316 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 OR6K6Q8NGW6 343 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 SMAP2Q8WU79 429 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-229ENST00000486665 BCL2L2Q92843 193 aaPredicted RBP11.2□□□□□ -0.62
HDAC6-229ENST00000486665 Q96MT0 163 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 FOXB1Q99853 325 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 NELFAQ9H3P2 528 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 AMBNQ9NP70 447 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 EMC7Q9NPA0 242 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 POLE4Q9NR33 117 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 TMEM38BQ9NVV0 291 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 TAS2R16Q9NYV7 291 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 MOKQ9UQ07 419 aa11.2□□□□□ -0.62
HDAC6-229ENST00000486665 INTS1Q8N201 2190 aaKnown RBP11.2□□□□□ -0.62
HDAC6-229ENST00000486665 ZNF469Q96JG9 3925 aaPredicted RBP11.19□□□□□ -0.62
HDAC6-229ENST00000486665 SH3D21A4FU49 640 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 PSKH1P11801 424 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 B4GALT1P15291 398 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 RPS7P62081 194 aaKnown RBP11.19□□□□□ -0.62
HDAC6-229ENST00000486665 MRPS34P82930 218 aaKnown RBP11.19□□□□□ -0.62
HDAC6-229ENST00000486665 TEKQ02763 1124 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 HSF2Q03933 536 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 KCNMB1Q16558 191 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 HIKESHIQ53FT3 197 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 C6orf141Q5SZD1 244 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 KLHL24Q6TFL4 600 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 ZNF813Q6ZN06 617 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 ZNF627Q7L945 461 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 GID4Q8IVV7 300 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 SKA3Q8IX90 412 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 SLC22A24Q8N4F4 322 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 SLC26A10Q8NG04 563 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 FGFBP3Q8TAT2 258 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 CA5BP1Q8WTZ4 195 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 SH3GL3Q99963 347 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 Q9H521 79 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 WDR76Q9H967 626 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 SIAEQ9HAT2 523 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 GALNT8Q9NY28 637 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 ELOVL5Q9NYP7 299 aa11.19□□□□□ -0.62
HDAC6-229ENST00000486665 CIB4A0PJX0 185 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 SELENOFO60613 162 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 RAD51DO75771 328 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 APOL3O95236 402 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 HLA-DQA2P01906 255 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 MRPL3P09001 348 aaKnown RBP11.18□□□□□ -0.62
HDAC6-229ENST00000486665 PATE4P0C8F1 98 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 NPR2P20594 1047 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 AGAP20933 346 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 CD79BP40259 229 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 ASCL1P50553 236 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 HCCSP53701 268 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 GLO1Q04760 184 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 ZNF91Q05481 1191 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 ENDOGQ14249 297 aaKnown RBP11.18□□□□□ -0.62
HDAC6-229ENST00000486665 TESK1Q15569 626 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 FBXL19-AS1Q494R0 122 aa11.18□□□□□ -0.62
HDAC6-229ENST00000486665 ANKRD16Q6P6B7 361 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms