RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 SMU1Q2TAY7 513 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 MTX3Q5HYI7 312 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 ATAD3BQ5T9A4 648 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 LCE4AQ5TA78 99 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 WBP2NLQ6ICG8 309 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 TMEM53Q6P2H8 277 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 LYPD2Q6UXB3 125 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 H1FNTQ75WM6 255 aaPredicted RBP6.75□□□□□ -1.33
XRN1-212ENST00000486211 MEPCEQ7L2J0 689 aaKnown RBP6.75□□□□□ -1.33
XRN1-212ENST00000486211 NLRC3Q7RTR2 1065 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 HDXQ7Z353 690 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 SNX32Q86XE0 403 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 PTOV1Q86YD1 416 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 PDZD9Q8IXQ8 264 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 CADM2Q8N3J6 435 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 SPC24Q8NBT2 197 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 ADPRHL1Q8NDY3 354 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 OR6N1Q8NGY5 312 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 VANGL1Q8TAA9 524 aaPredicted RBP6.75□□□□□ -1.33
XRN1-212ENST00000486211 XAGE5Q8WWM1 108 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 TAAR8Q969N4 342 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 RCC1LQ96I51 464 aaKnown RBP6.75□□□□□ -1.33
XRN1-212ENST00000486211 POM121L2Q96KW2 1035 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 SLC19A3Q9BZV2 496 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 SLC38A1Q9H2H9 487 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 LRMDAQ9H2I8 198 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 DPH5Q9H2P9 285 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 TUBB1Q9H4B7 451 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 RLIMQ9NVW2 624 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 PRDM4Q9UKN5 801 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 STARD9Q9P2P6 4700 aa6.75□□□□□ -1.33
XRN1-212ENST00000486211 LOC100509620A0A075B734 347 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 IQCMA0A1B0GVH7 501 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 H3BSA7 217 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 CFLARO15519 480 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 RAD51CO43502 376 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 AGR2O95994 175 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 CYB5R3P00387 301 aaPredicted RBP6.74□□□□□ -1.33
XRN1-212ENST00000486211 PTHP01270 115 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 PRG2P13727 222 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 GTF2E2P29084 291 aaKnown RBP6.74□□□□□ -1.33
XRN1-212ENST00000486211 PSG7Q13046 419 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 CALCOCO2Q13137 446 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 PTGR1Q14914 329 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 FAM201AQ5SY85 155 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 ATG16L1Q676U5 607 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 TNFAIP8L2Q6P589 184 aaPredicted RBP6.74□□□□□ -1.33
XRN1-212ENST00000486211 LRFN4Q6PJG9 635 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 CRIP3Q6Q6R5 217 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 ADAMTSL5Q6ZMM2 481 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 RNF165Q6ZSG1 346 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 DPPA2Q7Z7J5 298 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 SLC22A9Q8IVM8 553 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 UEVLDQ8IX04 471 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 ZNF440Q8IYI8 595 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 CLECL1Q8IZS7 167 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 MIER2Q8N344 545 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 KRTCAP2Q8N6L1 136 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 NATD1Q8N6N6 113 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 ANKFN1Q8N957 763 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 OR2Z1Q8NG97 314 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 OR4K5Q8NGD3 323 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 OR4C13Q8NGP0 309 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 OR5R1Q8NH85 324 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 OR2T6Q8NHC8 308 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 ZNF420Q8TAQ5 688 aaPredicted RBP6.74□□□□□ -1.33
XRN1-212ENST00000486211 TMEM54Q969K7 222 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 SLC41A3Q96GZ6 507 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 OR2V2Q96R30 315 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 RANBP3Q9H6Z4 567 aaPredicted RBP6.74□□□□□ -1.33
XRN1-212ENST00000486211 RNF121Q9H920 327 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 SERTAD4Q9NUC0 356 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 IL19Q9UHD0 177 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 TMED5Q9Y3A6 229 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 FAM96BQ9Y3D0 163 aa6.74□□□□□ -1.33
XRN1-212ENST00000486211 CDHR4A6H8M9 788 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 IFNL4K9M1U5 179 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 ANGPTL7O43827 346 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 TIMM8AO60220 97 aaPredicted RBP6.73□□□□□ -1.33
XRN1-212ENST00000486211 DUS4LO95620 317 aaKnown RBP6.73□□□□□ -1.33
XRN1-212ENST00000486211 C1QCP02747 245 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 LIPFP07098 398 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 NEFHP12036 1026 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 CCNOP22674 350 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 TNFSF4P23510 183 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 LMO1P25800 156 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 STOMP27105 288 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 APLNRP35414 380 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 RPL3P39023 403 aaKnown RBP6.73□□□□□ -1.33
XRN1-212ENST00000486211 PSMB10P40306 273 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 CSNK1A1P48729 337 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 PPP1CBP62140 327 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 IKZF1Q13422 519 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 SYPL1Q16563 259 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 SLC36A2Q495M3 483 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 GPAT3Q53EU6 434 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 FAM69AQ5T7M9 428 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 METTL11BQ5VVY1 283 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 FRMD7Q6ZUT3 714 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 VRK2Q86Y07 508 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms