RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 PLEKHA1Q9HB21 404 aa4.69□□□□□ -1.66
CCDC39-205ENST00000485055 ZNF701Q9NV72 531 aaPredicted RBP4.69□□□□□ -1.66
CCDC39-205ENST00000485055 ZNF490Q9ULM2 529 aaPredicted RBP4.69□□□□□ -1.66
CCDC39-205ENST00000485055 ABCG2Q9UNQ0 655 aa4.69□□□□□ -1.66
CCDC39-205ENST00000485055 UQCRHLA0A096LP55 91 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 A0A0J9YVX5 310 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 TOX4O94842 621 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 CRYZL1O95825 349 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 UQCRHP07919 91 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 CT62P0C5K7 136 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 NR2C1P13056 603 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 CBR1P16152 277 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 STOMP27105 288 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 CALCRP30988 508 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 NR0B1P51843 470 aaKnown RBP4.68□□□□□ -1.66
CCDC39-205ENST00000485055 RAB10P61026 200 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 UBE2MP61081 183 aaKnown RBP4.68□□□□□ -1.66
CCDC39-205ENST00000485055 CKAP4Q07065 602 aaKnown RBP4.68□□□□□ -1.66
CCDC39-205ENST00000485055 ELAVL1Q15717 326 aaKnown RBP4.68□□□□□ -1.66
CCDC39-205ENST00000485055 C6orf141Q5SZD1 244 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 MEDAGQ5VYS4 303 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 MFSD12Q6NUT3 480 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 ZNF562Q6V9R5 426 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 ISCA2Q86U28 154 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 TMEM132CQ8N3T6 1108 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 C2orf73Q8N5S3 287 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-205ENST00000485055 STPG3Q8N7X2 389 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 ZNF441Q8N8Z8 693 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 POC1AQ8NBT0 407 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 APCDD1LQ8NCL9 501 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 ZNF740Q8NDX6 193 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 ADPRHL1Q8NDY3 354 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 OR14A16Q8NHC5 309 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 NEK7Q8TDX7 302 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-205ENST00000485055 PYDC1Q8WXC3 89 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 NEIL2Q969S2 332 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 ZC3HAV1LQ96H79 300 aaKnown RBP4.68□□□□□ -1.66
CCDC39-205ENST00000485055 ZNF570Q96NI8 536 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 SEPHS2Q99611 448 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 PTDSS2Q9BVG9 487 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 MS4A8Q9BY19 250 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 CADM1Q9BY67 442 aaKnown RBP4.68□□□□□ -1.66
CCDC39-205ENST00000485055 SLA2Q9H6Q3 261 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 DDX31Q9H8H2 851 aaKnown RBP4.68□□□□□ -1.66
CCDC39-205ENST00000485055 CAB39LQ9H9S4 337 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 LYARQ9NX58 379 aaKnown RBP4.68□□□□□ -1.66
CCDC39-205ENST00000485055 CMTM6Q9NX76 183 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 SPTBN2O15020 2390 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 WDFY3Q8IZQ1 3526 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 SYCE1LA8MT33 242 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 RAB29O14966 203 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 CFLARO15519 480 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 TNFAIP8O95379 198 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 IGKV3-11P04433 115 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 GLI4P10075 376 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 CDH1P12830 882 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 GNLYP22749 145 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 SSTR1P30872 391 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 MPIP34949 423 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 OMPP47874 163 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 NPBWR2P48146 333 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 CSNK1A1P48729 337 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 ASCL1P50553 236 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 TAS2R39P59534 338 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 SLC17A1Q14916 467 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 ZNF630Q2M218 657 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-205ENST00000485055 DEFB110Q30KQ9 67 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 FAM174BQ3ZCQ3 159 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 PIGGQ5H8A4 983 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 HACD4Q5VWC8 232 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 REEP3Q6NUK4 255 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 TRMT10BQ6PF06 316 aaKnown RBP4.68□□□□□ -1.66
CCDC39-205ENST00000485055 SSX9Q7RTT3 188 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 ENTHD1Q8IYW4 607 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 SPAG16Q8N0X2 631 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 TMEM178AQ8NBL3 297 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 B3GNT7Q8NFL0 401 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 STAG3L4Q8TBR4 150 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 C10orf35Q96D05 121 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 PRAP1Q96NZ9 151 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 UTP23Q9BRU9 249 aaKnown RBP4.68□□□□□ -1.66
CCDC39-205ENST00000485055 ILKAPQ9H0C8 392 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-205ENST00000485055 ZDHHC11Q9H8X9 412 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 BEX1Q9HBH7 125 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 Q9N2K0 584 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 ZNF71Q9NQZ8 489 aaPredicted RBP4.68□□□□□ -1.66
CCDC39-205ENST00000485055 INPP5EQ9NRR6 644 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 PLA2G2DQ9UNK4 145 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 FREM2Q5SZK8 3169 aa4.68□□□□□ -1.66
CCDC39-205ENST00000485055 GCN1Q92616 2671 aaKnown RBP4.68□□□□□ -1.66
CCDC39-205ENST00000485055 PPIAL4EA0A075B759 164 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 TCRBV9S1A1TA0A576 114 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 TMEM200CA6NKL6 621 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 H3BNX3 289 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 AP4M1O00189 453 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 CHST10O43529 356 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 NEURL1O76050 574 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 CLDN1O95832 211 aa4.67□□□□□ -1.66
CCDC39-205ENST00000485055 SP1P08047 785 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms