RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 CCDC168Q8NDH2 2452 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 IGLV1-36A0A0B4J1U3 117 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 SLC16A7O60669 478 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 SMPD2O60906 423 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 TIPRLO75663 272 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 SNAP29O95721 258 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 PTHP01270 115 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 PATE4P0C8F1 98 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 GAAP10253 952 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 LAP3P28838 519 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 GUCA1AP43080 201 aaPredicted RBP13.76□□□□□ -0.21
UPF3A-208ENST00000484246 ERFP50548 548 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 PCBD1P61457 104 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 LSM6P62312 80 aaKnown RBP13.76□□□□□ -0.21
UPF3A-208ENST00000484246 HGFACQ04756 655 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 ENDOGQ14249 297 aaKnown RBP13.76□□□□□ -0.21
UPF3A-208ENST00000484246 ETFDHQ16134 617 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 KCNMB1Q16558 191 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 CLEC12AQ5QGZ9 265 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 AGAP6Q5VW22 663 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 FAHD1Q6P587 224 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 ZBTB46Q86UZ6 589 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 JAZF1Q86VZ6 243 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 GLB1L2Q8IW92 636 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 NPEPL1Q8NDH3 523 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 OR2T33Q8NG76 320 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 HTRA1Q92743 480 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 FBXO17Q96EF6 278 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 NUAK2Q9H093 628 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 KCNN2Q9H2S1 579 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 CBLN4Q9NTU7 201 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 REV1Q9UBZ9 1251 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 AP4S1Q9Y587 144 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 FKBP7Q9Y680 259 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 ATP23Q9Y6H3 246 aa13.76□□□□□ -0.21
UPF3A-208ENST00000484246 A0A1W2PPL8 197 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 C12orf71A8MTZ7 269 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 RENP00797 406 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 CD8AP01732 235 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 ZNF32P17041 273 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 FASP25445 335 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 NOS3P29474 1203 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 APOBEC3AP31941 199 aaPredicted RBP13.75□□□□□ -0.21
UPF3A-208ENST00000484246 ARHGDIAP52565 204 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 RAB39AQ14964 217 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 EFNB3Q15768 340 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 SGCAQ16586 387 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 ZNF362Q5T0B9 420 aaPredicted RBP13.75□□□□□ -0.21
UPF3A-208ENST00000484246 LEG1Q6P5S2 330 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 PRSS57Q6UWY2 283 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 KRTAP1-3Q8IUG1 177 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 HS3ST5Q8IZT8 346 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 FBXL14Q8N1E6 418 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 MUC15Q8N387 334 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 PARP8Q8N3A8 854 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 OR4Q3Q8NH05 313 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 OR4K13Q8NH42 304 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 OR5K1Q8NHB7 308 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 NMNAT3Q96T66 252 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 TSSK6Q9BXA6 273 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 GABARAPL1Q9H0R8 117 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 CCNB1IP1Q9NPC3 277 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 LAMP3Q9UQV4 416 aa13.75□□□□□ -0.21
UPF3A-208ENST00000484246 AKAP6Q13023 2319 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 CADP27708 2225 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 OR6C68A6NDL8 312 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 DCTN6O00399 190 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 ICMTO60725 284 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 SOX14O95416 240 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 OSMP13725 252 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 NR4A1P22736 598 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 PTH2RP49190 550 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 FABP6P51161 128 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 PLP2Q04941 152 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.74□□□□□ -0.21
UPF3A-208ENST00000484246 SCRN3Q0VDG4 424 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 AQP6Q13520 282 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 SLC36A3Q495N2 470 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 SHEQ5VZ18 495 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 HIPK1Q86Z02 1210 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 OR6V1Q8N148 313 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 LRRC18Q8N456 261 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 SLC30A7Q8NEW0 376 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 SDR9C7Q8NEX9 313 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 OR52E2Q8NGJ4 325 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 TEX47Q8TBZ9 253 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 BDH2Q9BUT1 245 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 ZNF416Q9BWM5 594 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 OR2H1Q9GZK4 316 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 ZNF556Q9HAH1 456 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 ATPIF1Q9UII2 106 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 KLHL21Q9UJP4 597 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 B9D1Q9UPM9 204 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 TIMM10BQ9Y5J6 103 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 AKAP9Q99996 3911 aa13.74□□□□□ -0.21
UPF3A-208ENST00000484246 ROS1P08922 2347 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 IQCMA0A1B0GVH7 501 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 SCG5P05408 212 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 IGFBP1P08833 259 aaPredicted RBP13.73□□□□□ -0.21
UPF3A-208ENST00000484246 COX5BP10606 129 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms