RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	ZNF138	P52744	262 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	RBX1	P62877	108 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	OGDH	Q02218	1023 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	ZNF92	Q03936	586 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	ANKDD1A	Q495B1	522 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	SLC36A3	Q495N2	470 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	CFAP157	Q5JU67	520 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	AP1AR	Q63HQ0	302 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	SPINT4	Q6UDR6	99 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	TEX43	Q6ZNM6	134 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	PPP1R42	Q7Z4L9	355 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	OR9A2	Q8NGT5	310 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	MAGEE2	Q8TD90	523 aa	Predicted RBP	1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	SHC3	Q92529	594 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	SLC25A46	Q96AG3	418 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	MYCBP	Q99417	103 aa	Predicted RBP	1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	PLIN2	Q99541	437 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	P2RX4	Q99571	388 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	SLC39A3	Q9BRY0	314 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	TCHP	Q9BT92	498 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	NT5C3A	Q9H0P0	336 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	UFSP2	Q9NUQ7	469 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	RNF14	Q9UBS8	474 aa		1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	SAMHD1	Q9Y3Z3	626 aa	Known RBP	1.15	□□□□□ -2.23
CCNL1-223	ENST00000481173	CACNA1D	Q01668	2161 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	ATP10A	O60312	1499 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	IGHV3OR16-8	A0A075B7F1	116 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	C15orf38-AP3S2	A0A0A6YYH1	394 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173		A0A0B4J2A0	478 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173		A0A1B0GWJ7	208 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	CLRN2	A0PK11	232 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	C5orf63	A6NC05	138 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173		J3QRE1	110 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	FOXE1	O00358	373 aa	Predicted RBP	1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	PALM	O75781	387 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	OR7A10	O76100	309 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	FGF1	P05230	155 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	TPM2	P07951	284 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	CALM1	P0DP23	149 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	CALM2	P0DP24	149 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	CALM3	P0DP25	149 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	HSPA5	P11021	654 aa	Known RBP	1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	KRT13	P13646	458 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	DTYMK	P23919	212 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	DUSP3	P51452	185 aa	Predicted RBP	1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	UGT2B15	P54855	530 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	NUTF2	P61970	127 aa	Known RBP	1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	MEF2C	Q06413	473 aa	Predicted RBP	1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	PDK3	Q15120	406 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	DGUOK	Q16854	277 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	TTC23	Q5W5X9	447 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	SASS6	Q6UVJ0	657 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	RGS9BP	Q6ZS82	235 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	FAM43B	Q6ZT52	329 aa	Predicted RBP	1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	ASCL5	Q7RTU5	278 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	PEX26	Q7Z412	305 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	LHFPL3	Q86UP9	236 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	ZNF683	Q8IZ20	524 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	MFSD9	Q8NBP5	474 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	GMCL1P1	Q8NEA9	526 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	OR5M1	Q8NGP8	315 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	RLN3	Q8WXF3	142 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	SENP8	Q96LD8	212 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	HSFY1	Q96LI6	401 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	TSGA13	Q96PP4	275 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	PARP12	Q9H0J9	701 aa	Known RBP	1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	LIN28A	Q9H9Z2	209 aa	Known RBP	1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	POLE4	Q9NR33	117 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	EXTL2	Q9UBQ6	330 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	SHPK	Q9UHJ6	478 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	TSSC4	Q9Y5U2	329 aa	Predicted RBP	1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	CDHR2	Q9BYE9	1310 aa		1.14	□□□□□ -2.23
CCNL1-223	ENST00000481173	TENM1	Q9UKZ4	2725 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	SPECC1L-ADORA2A	F8WAN1	911 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	TBX19	O60806	448 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	WBP4	O75554	376 aa	Known RBP	1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	DEDD	O75618	318 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	IGLV6-57	P01721	117 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	DBT	P11182	482 aa	Known RBP	1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	CD99	P14209	185 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	RPA2	P15927	270 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	NCK1	P16333	377 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	IL1RN	P18510	177 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	ATP5I	P56385	69 aa	Predicted RBP	1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	CBX1	P83916	185 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	ELP6	Q0PNE2	266 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	LRRC74A	Q0VAA2	488 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	ZMYND11	Q15326	602 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	PDK4	Q16654	411 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	PTPN20	Q4JDL3	420 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	SFT2D3	Q587I9	215 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	SPECC1L	Q69YQ0	1117 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	OR4F3	Q6IEY1	312 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	OR2A2	Q6IF42	318 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	HCP5	Q6MZN7	132 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	CASC1	Q6TDU7	716 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	KDELC1	Q6UW63	502 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	NANOGNB	Q7Z5D8	188 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	DHDDS	Q86SQ9	333 aa		1.13	□□□□□ -2.23
CCNL1-223	ENST00000481173	WDFY1	Q8IWB7	410 aa		1.13	□□□□□ -2.23

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms