RNA–Protein interactions for RNA: ENST00000478215.1

COL1A2-207, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 3

Gene COL1A2, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-207ENST00000478215 TMEM53Q6P2H8 277 aa11.24□□□□□ -0.61
COL1A2-207ENST00000478215 PRSS57Q6UWY2 283 aa11.24□□□□□ -0.61
COL1A2-207ENST00000478215 TMEM179BQ7Z7N9 219 aa11.24□□□□□ -0.61
COL1A2-207ENST00000478215 AQP11Q8NBQ7 271 aa11.24□□□□□ -0.61
COL1A2-207ENST00000478215 NUP37Q8NFH4 326 aa11.24□□□□□ -0.61
COL1A2-207ENST00000478215 IL17RDQ8NFM7 739 aa11.24□□□□□ -0.61
COL1A2-207ENST00000478215 OR8D4Q8NGM9 314 aa11.24□□□□□ -0.61
COL1A2-207ENST00000478215 FNDC8Q8TC99 324 aa11.24□□□□□ -0.61
COL1A2-207ENST00000478215 POP5Q969H6 163 aaKnown RBP11.24□□□□□ -0.61
COL1A2-207ENST00000478215 TSSK2Q96PF2 358 aa11.24□□□□□ -0.61
COL1A2-207ENST00000478215 ERMAPQ96PL5 475 aaPredicted RBP11.24□□□□□ -0.61
COL1A2-207ENST00000478215 PLA2G12AQ9BZM1 189 aa11.24□□□□□ -0.61
COL1A2-207ENST00000478215 SYT4Q9H2B2 425 aa11.24□□□□□ -0.61
COL1A2-207ENST00000478215 EGLN3Q9H6Z9 239 aa11.24□□□□□ -0.61
COL1A2-207ENST00000478215 REEP1Q9H902 201 aa11.24□□□□□ -0.61
COL1A2-207ENST00000478215 RNF121Q9H920 327 aa11.24□□□□□ -0.61
COL1A2-207ENST00000478215 EMC7Q9NPA0 242 aa11.24□□□□□ -0.61
COL1A2-207ENST00000478215 DLL4Q9NR61 685 aa11.24□□□□□ -0.61
COL1A2-207ENST00000478215 VSX1Q9NZR4 365 aaPredicted RBP11.24□□□□□ -0.61
COL1A2-207ENST00000478215 FN1P02751 2386 aaKnown RBP11.24□□□□□ -0.61
COL1A2-207ENST00000478215 TRIM64A6NGJ6 449 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 TRIM64BA6NI03 449 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 DCTN6O00399 190 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 AHCYL1O43865 530 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 CST1P01037 141 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 IGFBP1P08833 259 aaPredicted RBP11.23□□□□□ -0.61
COL1A2-207ENST00000478215 OR4A8P0C604 315 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 APEHP13798 732 aaKnown RBP11.23□□□□□ -0.61
COL1A2-207ENST00000478215 NPR2P20594 1047 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 NR4A1P22736 598 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 APEX1P27695 318 aaKnown RBP11.23□□□□□ -0.61
COL1A2-207ENST00000478215 RPS6KA3P51812 740 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 ENDOGQ14249 297 aaKnown RBP11.23□□□□□ -0.61
COL1A2-207ENST00000478215 MICAQ29983 383 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 PABPC1L2AQ5JQF8 200 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 CLEC12AQ5QGZ9 265 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 UGT2A3Q6UWM9 527 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 ADCK1Q86TW2 530 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 CIARTQ8N365 385 aaPredicted RBP11.23□□□□□ -0.61
COL1A2-207ENST00000478215 CPEB3Q8NE35 698 aaKnown RBP11.23□□□□□ -0.61
COL1A2-207ENST00000478215 SLC30A7Q8NEW0 376 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 AKR7LQ8NHP1 331 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 SLCO4A1Q96BD0 722 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 TRMT61AQ96FX7 289 aaKnown RBP11.23□□□□□ -0.61
COL1A2-207ENST00000478215 IFT27Q9BW83 186 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 ZNF416Q9BWM5 594 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 RERGLQ9H628 205 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 ZNF442Q9H7R0 627 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 POLE4Q9NR33 117 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 CDH10Q9Y6N8 788 aa11.23□□□□□ -0.61
COL1A2-207ENST00000478215 ANK3Q12955 4377 aaKnown RBP11.22□□□□□ -0.61
COL1A2-207ENST00000478215 TMEM129A0AVI4 362 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 ARPC3O15145 178 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 SLC16A7O60669 478 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 FKBP6O75344 327 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 MPZL1O95297 269 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 GPANK1O95872 356 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 TP53P04637 393 aaPredicted RBP11.22□□□□□ -0.61
COL1A2-207ENST00000478215 CST2P09228 141 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 HIST1H1CP16403 213 aaKnown RBP11.22□□□□□ -0.61
COL1A2-207ENST00000478215 HIVEP2P31629 2446 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 SERPINF1P36955 418 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 PSG4Q00888 419 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 HSF2Q03933 536 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 LEG1Q6P5S2 330 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 DPPA2Q7Z7J5 298 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 HS3ST5Q8IZT8 346 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 LINC00471Q8N535 108 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 OR10G2Q8NGC3 310 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 OR4K13Q8NH42 304 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 DGCR6LQ9BY27 220 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 NUAK2Q9H093 628 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 WNT5BQ9H1J7 359 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 LRMDAQ9H2I8 198 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 FN3KQ9H479 309 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 CCNB1IP1Q9NPC3 277 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 IL20Q9NYY1 176 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 FBXL3Q9UKT7 428 aa11.22□□□□□ -0.61
COL1A2-207ENST00000478215 COA3Q9Y2R0 106 aaPredicted RBP11.22□□□□□ -0.61
COL1A2-207ENST00000478215 ARHGAP32A7KAX9 2087 aa11.21□□□□□ -0.61
COL1A2-207ENST00000478215 OR6C68A6NDL8 312 aa11.21□□□□□ -0.61
COL1A2-207ENST00000478215 H7C1Q1 480 aa11.21□□□□□ -0.61
COL1A2-207ENST00000478215 H7C417 338 aa11.21□□□□□ -0.61
COL1A2-207ENST00000478215 BHLHE40O14503 412 aa11.21□□□□□ -0.61
COL1A2-207ENST00000478215 KHDRBS3O75525 346 aaKnown RBP11.21□□□□□ -0.61
COL1A2-207ENST00000478215 ATP5HO75947 161 aa11.21□□□□□ -0.61
COL1A2-207ENST00000478215 SOX14O95416 240 aa11.21□□□□□ -0.61
COL1A2-207ENST00000478215 FAM157BP0CG42 384 aa11.21□□□□□ -0.61
COL1A2-207ENST00000478215 MSR1P21757 451 aa11.21□□□□□ -0.61
COL1A2-207ENST00000478215 RASSF2P50749 326 aa11.21□□□□□ -0.61
COL1A2-207ENST00000478215 CBX1P83916 185 aa11.21□□□□□ -0.61
COL1A2-207ENST00000478215 EFNB3Q15768 340 aa11.21□□□□□ -0.61
COL1A2-207ENST00000478215 SLC35F1Q5T1Q4 408 aa11.21□□□□□ -0.61
COL1A2-207ENST00000478215 RASSF6Q6ZTQ3 369 aa11.21□□□□□ -0.61
COL1A2-207ENST00000478215 SVOPLQ8N434 492 aa11.21□□□□□ -0.61
COL1A2-207ENST00000478215 PAPD5Q8NDF8 572 aaKnown RBP11.21□□□□□ -0.61
COL1A2-207ENST00000478215 SDR9C7Q8NEX9 313 aa11.21□□□□□ -0.61
COL1A2-207ENST00000478215 NMNAT3Q96T66 252 aa11.21□□□□□ -0.61
COL1A2-207ENST00000478215 NIPSNAP1Q9BPW8 284 aa11.21□□□□□ -0.61
COL1A2-207ENST00000478215 MRPL37Q9BZE1 423 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms