RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 SLC22A23A1A5C7 686 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 CPED1A4D0V7 1026 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 RNF222A6NCQ9 220 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 GGT3PA6NGU5 568 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 MPTX1A8MV57 137 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 IDSB3KWA1 339 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 LMO7DNF2Z398 122 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 PYCARD-AS1I3L0S3 204 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 I3L521 148 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 ADAM10O14672 748 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 ARPC1BO15143 372 aaKnown RBP6.18□□□□□ -1.42
UBR4-212ENST00000475973 EIF4EBP3O60516 100 aaPredicted RBP6.18□□□□□ -1.42
UBR4-212ENST00000475973 CREBL2O60519 120 aaPredicted RBP6.18□□□□□ -1.42
UBR4-212ENST00000475973 NPIPB7O75200 414 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 SRSF10O75494 262 aaKnown RBP6.18□□□□□ -1.42
UBR4-212ENST00000475973 CTAG2O75638 210 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 IGHMP01871 453 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 TACSTD2P09758 323 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 PNMTP11086 282 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 SLC25A4P12235 298 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 SSTR2P30874 369 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 SDHAP31040 664 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 DCTDP32321 178 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 EIF2S3P41091 472 aaKnown RBP6.18□□□□□ -1.42
UBR4-212ENST00000475973 KIR3DL2P43630 455 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 CENPAP49450 140 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 H2BFSP57053 126 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 TSPAN5P62079 268 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 EIF2B5Q13144 721 aaKnown RBP6.18□□□□□ -1.42
UBR4-212ENST00000475973 EXOSC7Q15024 291 aaKnown RBP6.18□□□□□ -1.42
UBR4-212ENST00000475973 PCK2Q16822 640 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 C2orf68Q2NKX9 166 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 DEFB133Q30KQ1 61 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 LY6G6FQ5SQ64 297 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 C1orf100Q5SVJ3 147 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 CDCP2Q5VXM1 449 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 ZNF660Q6AZW8 331 aaPredicted RBP6.18□□□□□ -1.42
UBR4-212ENST00000475973 FCRLBQ6BAA4 426 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 SFRP4Q6FHJ7 346 aaPredicted RBP6.18□□□□□ -1.42
UBR4-212ENST00000475973 GUSBP11Q6P575 273 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 TMEM81Q6P7N7 255 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 MOB3CQ70IA8 216 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 TMUB2Q71RG4 321 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 GLB1L2Q8IW92 636 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 SDR16C5Q8N3Y7 309 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 DTX3Q8N9I9 347 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 RCBTB1Q8NDN9 531 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 OR2AK2Q8NG84 335 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 OR6C4Q8NGE1 309 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 OR52R1Q8NGF1 315 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 OR52H1Q8NGJ2 320 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 OR2G2Q8NGZ5 317 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 OR1S1Q8NH92 325 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 SYNPRQ8TBG9 265 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 ADAMTS18Q8TE60 1221 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 SNX33Q8WV41 574 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 WDR89Q96FK6 387 aaPredicted RBP6.18□□□□□ -1.42
UBR4-212ENST00000475973 WDR92Q96MX6 357 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 PTCHD1Q96NR3 888 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 OR1F2PQ96R84 312 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 NMNAT3Q96T66 252 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 SEC22CQ9BRL7 303 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 AIFM2Q9BRQ8 373 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 G6PC3Q9BUM1 346 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 LRRC61Q9BV99 259 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 SEMA4CQ9C0C4 833 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 SRMSQ9H3Y6 488 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 GPN1Q9HCN4 374 aaPredicted RBP6.18□□□□□ -1.42
UBR4-212ENST00000475973 MMP25Q9NPA2 562 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 SLC2A8Q9NY64 477 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 EPHA6Q9UF33 1036 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 STEAP1Q9UHE8 339 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 KCNK7Q9Y2U2 307 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 KLHDC2Q9Y2U9 406 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 ADAM18Q9Y3Q7 739 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 SPACA6W5XKT8 324 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 SPEGQ15772 3267 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 ASCC3Q8N3C0 2202 aaKnown RBP6.18□□□□□ -1.42
UBR4-212ENST00000475973 CFAP47Q6ZTR5 3102 aa6.18□□□□□ -1.42
UBR4-212ENST00000475973 NUMA1Q14980 2115 aa6.17□□□□□ -1.42
UBR4-212ENST00000475973 TRAV8-7A0A075B6U6 113 aa6.17□□□□□ -1.42
UBR4-212ENST00000475973 TRAV14DV4A0A0A6YYC5 116 aa6.17□□□□□ -1.42
UBR4-212ENST00000475973 RFPL4AA6NLU0 287 aa6.17□□□□□ -1.42
UBR4-212ENST00000475973 TMEM212A6NML5 194 aa6.17□□□□□ -1.42
UBR4-212ENST00000475973 RFPL4AL1F8VTS6 287 aa6.17□□□□□ -1.42
UBR4-212ENST00000475973 DCTN6O00399 190 aa6.17□□□□□ -1.42
UBR4-212ENST00000475973 SLC17A2O00624 439 aa6.17□□□□□ -1.42
UBR4-212ENST00000475973 ABCD4O14678 606 aa6.17□□□□□ -1.42
UBR4-212ENST00000475973 PHYHO14832 338 aa6.17□□□□□ -1.42
UBR4-212ENST00000475973 TPD52L2O43399 206 aaKnown RBP6.17□□□□□ -1.42
UBR4-212ENST00000475973 TLX3O43711 291 aaPredicted RBP6.17□□□□□ -1.42
UBR4-212ENST00000475973 SSNA1O43805 119 aa6.17□□□□□ -1.42
UBR4-212ENST00000475973 SERPINI2O75830 405 aa6.17□□□□□ -1.42
UBR4-212ENST00000475973 WNT11O96014 354 aa6.17□□□□□ -1.42
UBR4-212ENST00000475973 TNFP01375 233 aa6.17□□□□□ -1.42
UBR4-212ENST00000475973 LPLP06858 475 aa6.17□□□□□ -1.42
UBR4-212ENST00000475973 GSTP1P09211 210 aaKnown RBP6.17□□□□□ -1.42
UBR4-212ENST00000475973 CSF1P09603 554 aa6.17□□□□□ -1.42
UBR4-212ENST00000475973 GIMD1P0DJR0 217 aa6.17□□□□□ -1.42
UBR4-212ENST00000475973 ANXA7P20073 488 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms