RNA–Protein interactions for RNA: ENST00000475344.1

LTN1-204, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene LTN1, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-204ENST00000475344 SERPINA3P01011 423 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 SERPIND1P05546 499 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 CRYGBP07316 175 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 LINC00869P0C866 280 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 CD34P28906 385 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 FOXN2P32314 431 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 TNNT2P45379 298 aaPredicted RBP2.08□□□□□ -2.08
LTN1-204ENST00000475344 SSR4P51571 173 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 SLC7A9P82251 487 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 TCP10Q12799 353 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 CLINT1Q14677 625 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 PPP1R7Q15435 360 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 TGFBIQ15582 683 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 RAET1LQ5VY80 246 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 STRADAQ7RTN6 431 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 CDR2LQ86X02 465 aaPredicted RBP2.08□□□□□ -2.08
LTN1-204ENST00000475344 OR4S2Q8NH73 311 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 FBXO32Q969P5 355 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 MED8Q96G25 268 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 WFIKKN1Q96NZ8 548 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 SLC7A8Q9UHI5 535 aa2.08□□□□□ -2.08
LTN1-204ENST00000475344 A0A1B0GVX0 72 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 K7EM74 188 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 MRPS12O15235 138 aaKnown RBP2.07□□□□□ -2.08
LTN1-204ENST00000475344 RAB3DO95716 219 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 CYB561P49447 251 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 RORCP51449 518 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 SYCNQ0VAF6 134 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 VPS26BQ4G0F5 336 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 TMEM107Q6UX40 140 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 CERS6Q6ZMG9 384 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 ZNF493Q6ZR52 646 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 TAS2R42Q7RTR8 314 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 HDDC2Q7Z4H3 204 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 LGI3Q8N145 548 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 PDIK1LQ8N165 341 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 OSR2Q8N2R0 312 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 C15orf56Q8N910 161 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 SDR9C7Q8NEX9 313 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 OR10R2Q8NGX6 335 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 PLPPR1Q8TBJ4 325 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 SEH1LQ96EE3 360 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 TCHPQ9BT92 498 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 ISYNA1Q9NPH2 558 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 ZNRD1Q9P1U0 126 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 HPCAL4Q9UM19 191 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 STARD10Q9Y365 291 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 TMEM14AQ9Y6G1 99 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 SHANK1Q9Y566 2161 aa2.07□□□□□ -2.08
LTN1-204ENST00000475344 IGHV3-74A0A0B4J1X5 117 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 MPHOSPH10O00566 681 aaKnown RBP2.06□□□□□ -2.08
LTN1-204ENST00000475344 EEDO75530 441 aaKnown RBP2.06□□□□□ -2.08
LTN1-204ENST00000475344 CST1P01037 141 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 CALM1P0DP23 149 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 CALM2P0DP24 149 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 CALM3P0DP25 149 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 ZNF43P17038 809 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 TNNI1P19237 187 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 HRH1P35367 487 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 NCBP2P52298 156 aaKnown RBP eCLIP2.06□□□□□ -2.08
LTN1-204ENST00000475344 IRX3P78415 501 aaPredicted RBP2.06□□□□□ -2.08
LTN1-204ENST00000475344 PON3Q15166 354 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 MAJINQ3KP22 176 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 THEM4Q5T1C6 240 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 HES5Q5TA89 166 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 RNASEKQ6P5S7 137 aaKnown RBP2.06□□□□□ -2.08
LTN1-204ENST00000475344 TEX43Q6ZNM6 134 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 LINC00173Q6ZV60 143 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 STPG2Q8N412 459 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 LIX1Q8N485 282 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 NOXO1Q8NFA2 376 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 KCNG3Q8TAE7 436 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 CXorf40AQ8TE69 158 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 CREB3L1Q96BA8 519 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 PLIN2Q99541 437 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 LZTS2Q9BRK4 669 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 RPF2Q9H7B2 306 aaKnown RBP2.06□□□□□ -2.08
LTN1-204ENST00000475344 METTL7AQ9H8H3 244 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 PSMC3IPQ9P2W1 217 aaPredicted RBP2.06□□□□□ -2.08
LTN1-204ENST00000475344 MAPK8IP3Q9UPT6 1336 aa2.06□□□□□ -2.08
LTN1-204ENST00000475344 ITGB4P16144 1822 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 XKRY2A2RUG3 117 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 SGK1O00141 431 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 CDC7O00311 574 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 KMOO15229 486 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 FGGP02679 453 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 CT62P0C5K7 136 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 TROVE2P10155 538 aaKnown RBP eCLIP2.05□□□□□ -2.08
LTN1-204ENST00000475344 CCNB1P14635 433 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 FOLR1P15328 257 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 NAMPTP43490 491 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 YWHAGP61981 247 aaKnown RBP eCLIP2.05□□□□□ -2.08
LTN1-204ENST00000475344 RABL6Q3YEC7 729 aaPredicted RBP2.05□□□□□ -2.08
LTN1-204ENST00000475344 ANKRD22Q5VYY1 191 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 DUX4L9Q6RFH8 374 aaPredicted RBP2.05□□□□□ -2.08
LTN1-204ENST00000475344 BIVMQ86UB2 503 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 MS4A15Q8N5U1 240 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 EID2Q8N6I1 236 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 B3GNT7Q8NFL0 401 aa2.05□□□□□ -2.08
LTN1-204ENST00000475344 OR56B2PQ8NGI1 322 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms