RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 LOC100509620A0A075B734 347 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 IGKV1D-43A0A0B4J1Z2 117 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 C5orf49A4QMS7 147 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 J3QLI3 93 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 WIPF1O43516 503 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 MGRN1O60291 552 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 FAM107AO95990 144 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 EGR1P18146 543 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 RBM34P42696 430 aaKnown RBP12.19□□□□□ -0.46
COL2A1-205ENST00000474996 MMP15P51511 669 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 TAS2R41P59536 307 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 FMODQ06828 376 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 SGCAQ16586 387 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 VMACQ2NL98 169 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 ZNF718Q3SXZ3 478 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 FAM209AQ5JX71 171 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 CCDC80Q76M96 950 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 NANPQ8TBE9 248 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 SLC25A40Q8TBP6 338 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 RASSF5Q8WWW0 418 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 NMD3Q96D46 503 aaKnown RBP12.19□□□□□ -0.46
COL2A1-205ENST00000474996 ZMYND19Q96E35 227 aaPredicted RBP12.19□□□□□ -0.46
COL2A1-205ENST00000474996 ELMOD3Q96FG2 381 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 MARS2Q96GW9 593 aaKnown RBP12.19□□□□□ -0.46
COL2A1-205ENST00000474996 GAL3ST1Q99999 423 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 SIKE1Q9BRV8 207 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 SUCNR1Q9BXA5 334 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 C7orf69Q9H7B7 122 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 FGFR1OP2Q9NVK5 253 aa12.19□□□□□ -0.46
COL2A1-205ENST00000474996 EIF3KQ9UBQ5 218 aaKnown RBP12.19□□□□□ -0.46
COL2A1-205ENST00000474996 PLSCR5A0PG75 271 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 ISPDA4D126 451 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 ZSCAN5BA6NJL1 495 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 LIMS1P48059 325 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 GDI2P50395 445 aaKnown RBP12.18□□□□□ -0.46
COL2A1-205ENST00000474996 ERVK-25P63136 954 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 LCN2P80188 198 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 PSG4Q00888 419 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 CD47Q08722 323 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 PIN1Q13526 163 aaPredicted RBP12.18□□□□□ -0.46
COL2A1-205ENST00000474996 LAPTM4AQ15012 233 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 CGB2Q6NT52 195 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 RFPL4BQ6ZWI9 263 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 BPIFB2Q8N4F0 458 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 KLF14Q8TD94 323 aaPredicted RBP12.18□□□□□ -0.46
COL2A1-205ENST00000474996 TSPEARQ8WU66 669 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 TMEM239Q8WW34 195 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 C22orf15Q8WYQ4 148 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 OR2J1Q9GZK6 312 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 NSRP1Q9H0G5 558 aaKnown RBP12.18□□□□□ -0.46
COL2A1-205ENST00000474996 SMURF2Q9HAU4 748 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 ESM1Q9NQ30 184 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 STX18Q9P2W9 335 aaKnown RBP12.18□□□□□ -0.46
COL2A1-205ENST00000474996 OPN4Q9UHM6 478 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 RIMS3Q9UJD0 308 aa12.18□□□□□ -0.46
COL2A1-205ENST00000474996 UBOX5O94941 541 aa12.17□□□□□ -0.46
COL2A1-205ENST00000474996 OR5F1O95221 314 aa12.17□□□□□ -0.46
COL2A1-205ENST00000474996 IGF2P01344 180 aa12.17□□□□□ -0.46
COL2A1-205ENST00000474996 TSPAN19P0C672 248 aa12.17□□□□□ -0.46
COL2A1-205ENST00000474996 GATA3P23771 443 aa12.17□□□□□ -0.46
COL2A1-205ENST00000474996 CBX1P83916 185 aa12.17□□□□□ -0.46
COL2A1-205ENST00000474996 HNRNPA0Q13151 305 aaKnown RBP12.17□□□□□ -0.46
COL2A1-205ENST00000474996 TOP3AQ13472 1001 aaPredicted RBP12.17□□□□□ -0.46
COL2A1-205ENST00000474996 SPRNQ5BIV9 151 aa12.17□□□□□ -0.46
COL2A1-205ENST00000474996 MBNL2Q5VZF2 373 aaKnown RBP12.17□□□□□ -0.46
COL2A1-205ENST00000474996 NANOGP8Q6NSW7 305 aa12.17□□□□□ -0.46
COL2A1-205ENST00000474996 CLDN22Q8N7P3 220 aa12.17□□□□□ -0.46
COL2A1-205ENST00000474996 ZDHHC22Q8N966 263 aa12.17□□□□□ -0.46
COL2A1-205ENST00000474996 SGMS2Q8NHU3 365 aa12.17□□□□□ -0.46
COL2A1-205ENST00000474996 ABHD4Q8TB40 342 aa12.17□□□□□ -0.46
COL2A1-205ENST00000474996 LIPHQ8WWY8 451 aa12.17□□□□□ -0.46
COL2A1-205ENST00000474996 GEMIN6Q8WXD5 167 aaKnown RBP12.17□□□□□ -0.46
COL2A1-205ENST00000474996 EGLN1Q9GZT9 426 aa12.17□□□□□ -0.46
COL2A1-205ENST00000474996 TXNIPQ9H3M7 391 aa12.17□□□□□ -0.46
COL2A1-205ENST00000474996 UBAP1Q9NZ09 502 aa12.17□□□□□ -0.46
COL2A1-205ENST00000474996 BAG5Q9UL15 447 aa12.17□□□□□ -0.46
COL2A1-205ENST00000474996 MED31Q9Y3C7 131 aa12.17□□□□□ -0.46
COL2A1-205ENST00000474996 NPIPB13A6NJU9 1138 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 NPIPB4C9JG80 1138 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 FBP2O00757 339 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 PIP5K1CO60331 668 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 NGFP01138 241 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 FSHBP01225 129 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 LAP3P28838 519 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 OR1E2P47887 323 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 PPP1CBP62140 327 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 GABPB1Q06547 395 aaPredicted RBP12.16□□□□□ -0.46
COL2A1-205ENST00000474996 SLC3A1Q07837 685 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 AWAT1Q58HT5 328 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 ALG10Q5BKT4 473 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 RABL3Q5HYI8 236 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 FAM27BQ5VT28 67 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 SLC25A47Q6Q0C1 308 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 UNQ6126/PRO20091Q6UXV3 157 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 PIGWQ7Z7B1 504 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 CCT8L2Q96SF2 557 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 OR2H1Q9GZK4 316 aa12.16□□□□□ -0.46
COL2A1-205ENST00000474996 POLR2J2Q9GZM3 115 aaKnown RBP12.16□□□□□ -0.46
COL2A1-205ENST00000474996 POLR2J3Q9H1A7 115 aaKnown RBP12.16□□□□□ -0.46
COL2A1-205ENST00000474996 WNT5BQ9H1J7 359 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms