RNA–Protein interactions for RNA: ENST00000474707.1

RABGAP1-208, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 3

Gene RABGAP1, Length 670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-208ENST00000474707 CD1CP29017 333 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 PRDX3P30048 256 aaKnown RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 NMT1P30419 496 aaKnown RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 BMI1P35226 326 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 FDFT1P37268 417 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 VHLP40337 213 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 CSNK1EP49674 416 aaKnown RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 ARHGDIAP52565 204 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 HADHBP55084 474 aaKnown RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 CLDN18P56856 261 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 CARD18P57730 90 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 LINC00315P59091 139 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 RPL8P62917 257 aaKnown RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 PLOD1Q02809 727 aaPredicted RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 ZNF33BQ06732 778 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 HTR4Q13639 388 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 ZIC1Q15915 447 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 KLHL38Q2WGJ6 581 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 HSDL1Q3SXM5 330 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 GLYR1Q49A26 553 aaPredicted RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 TP53I3Q53FA7 332 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 FBXO48Q5FWF7 155 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 SLC25A48Q6ZT89 311 aaKnown RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 MICU2Q8IYU8 434 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 LINC01561Q8N1V8 128 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 PDCL2Q8N4E4 241 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 KIR3DL3Q8N743 410 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 SPERTQ8NA61 448 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 DRAXINQ8NBI3 349 aaPredicted RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 CATSPER1Q8NEC5 780 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 OR13F1Q8NGS4 319 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 OR9A4Q8NGU2 314 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 CNIH3Q8TBE1 160 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 FAM81AQ8TBF8 368 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 ACMSDQ8TDX5 336 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 TFB1MQ8WVM0 346 aaKnown RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 DNAJB3Q8WWF6 145 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 MRPS31Q92665 395 aaKnown RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 FGF14Q92915 247 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 TCEAL3Q969E4 200 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 CIDECQ96AQ7 238 aaPredicted RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 SGK3Q96BR1 496 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 IMMP1LQ96LU5 166 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 PRRC1Q96M27 445 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 C9orf85Q96MD7 179 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 ZNF578Q96N58 590 aaPredicted RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 TSNARE1Q96NA8 513 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 PANX1Q96RD7 426 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 TAAR1Q96RJ0 339 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 IL4I1Q96RQ9 567 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 P2RY13Q9BPV8 354 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 CENPKQ9BS16 269 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 TRIM62Q9BVG3 475 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 MRPL37Q9BZE1 423 aaKnown RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 RHBGQ9H310 441 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 PPDPFQ9H3Y8 114 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 CWH43Q9H720 699 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 ESM1Q9NQ30 184 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 TMEM9BQ9NQ34 198 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 MEPEQ9NQ76 525 aaPredicted RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 TIGARQ9NQ88 270 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 EXOSC3Q9NQT5 275 aaKnown RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 POLE4Q9NR33 117 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 GCNT4Q9P109 453 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 STOX2Q9P2F5 926 aaPredicted RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 EIF3KQ9UBQ5 218 aaKnown RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 CFAP45Q9UL16 551 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 VANGL2Q9ULK5 521 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 NAP1L2Q9ULW6 460 aaPredicted RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 SAMD4AQ9UPU9 718 aaKnown RBP1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 ERVW-1Q9UQF0 538 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 STARD10Q9Y365 291 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 ALG6Q9Y672 507 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 COMMD3-BMI1R4GMX3 469 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 PI4KAP42356 2102 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 GREB1Q4ZG55 1949 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 MGAQ8IWI9 3026 aa1.72□□□□□ -2.13
RABGAP1-208ENST00000474707 SPG11Q96JI7 2443 aa1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 ZNF532Q9HCE3 1301 aa1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 DOCK6Q96HP0 2047 aa1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 FOCADQ5VW36 1801 aa1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 ARHGAP21Q5T5U3 1957 aa1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 LOC100653049A0A140TA62 436 aa1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 A8MX80 341 aa1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 B4DXG7 233 aa1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 GOLGA8TH3BQL2 631 aa1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 ZNF701M0R085 212 aaPredicted RBP1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 KIF2AO00139 706 aaPredicted RBP1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 HIP1O00291 1037 aa1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 PES1O00541 588 aaKnown RBP1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 CXCL13O43927 109 aa1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 DFNA5O60443 496 aa1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 DNAJB6O75190 326 aa1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 KRT34O76011 436 aa1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 H6PDO95479 791 aa1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 LGI1O95970 557 aa1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 IGHV3-9P01782 118 aa1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 GAPDHP04406 335 aaKnown RBP1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 LGALS2P05162 132 aa1.71□□□□□ -2.14
RABGAP1-208ENST00000474707 TPM1P09493 284 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms