RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 EFCAB9A8MZ26 197 aa17.4■□□□□ 0.38
PDLIM4-206ENST00000474421 CXCR6O00574 342 aa17.4■□□□□ 0.38
PDLIM4-206ENST00000474421 ZNF682O95780 498 aa17.4■□□□□ 0.38
PDLIM4-206ENST00000474421 IGHV3-13P01766 116 aa17.4■□□□□ 0.38
PDLIM4-206ENST00000474421 COX4I1P13073 169 aa17.4■□□□□ 0.38
PDLIM4-206ENST00000474421 MAKP20794 623 aa17.4■□□□□ 0.38
PDLIM4-206ENST00000474421 CCNOP22674 350 aa17.4■□□□□ 0.38
PDLIM4-206ENST00000474421 KRTAP24-1Q3LI83 254 aa17.4■□□□□ 0.38
PDLIM4-206ENST00000474421 ZNF718Q3SXZ3 478 aa17.4■□□□□ 0.38
PDLIM4-206ENST00000474421 IFI44LQ53G44 452 aa17.4■□□□□ 0.38
PDLIM4-206ENST00000474421 ZNF730Q6ZMV8 503 aa17.4■□□□□ 0.38
PDLIM4-206ENST00000474421 CLDND2Q8NHS1 167 aa17.4■□□□□ 0.38
PDLIM4-206ENST00000474421 ACOT11Q8WXI4 607 aaPredicted RBP17.4■□□□□ 0.38
PDLIM4-206ENST00000474421 NDEL1Q9GZM8 345 aa17.4■□□□□ 0.38
PDLIM4-206ENST00000474421 EFCAB1Q9HAE3 211 aa17.4■□□□□ 0.38
PDLIM4-206ENST00000474421 MAN2C1Q9NTJ4 1040 aa17.4■□□□□ 0.38
PDLIM4-206ENST00000474421 ZNF446Q9NWS9 450 aa17.4■□□□□ 0.38
PDLIM4-206ENST00000474421 IGKV1D-43A0A0B4J1Z2 117 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 RP2O75695 350 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 CST2P09228 141 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 GCH1P30793 250 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 MAGEB1P43366 347 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 YAP1P46937 504 aaKnown RBP17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 SLC7A2P52569 658 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 ERVS71-1P61550 626 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 CCL8P80075 99 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 FKBP9P1Q75LS8 142 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 CBLL1Q75N03 491 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 CYP4Z1Q86W10 505 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 RFLNBQ8N5W9 214 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 LRRC75AQ8NAA5 344 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 FAM156AQ8NDB6 213 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 OR51A7Q8NH64 312 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 POM121L2Q96KW2 1035 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 TSPAN32Q96QS1 320 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 MED4Q9NPJ6 270 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 DECR2Q9NUI1 292 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 RHCGQ9UBD6 479 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 TIMM10BQ9Y5J6 103 aa17.39■□□□□ 0.37
PDLIM4-206ENST00000474421 TRAV27A0A087WT01 109 aa17.38■□□□□ 0.37
PDLIM4-206ENST00000474421 C5orf49A4QMS7 147 aa17.38■□□□□ 0.37
PDLIM4-206ENST00000474421 ERVK-25P63136 954 aa17.38■□□□□ 0.37
PDLIM4-206ENST00000474421 PSG4Q00888 419 aa17.38■□□□□ 0.37
PDLIM4-206ENST00000474421 FAM209AQ5JX71 171 aa17.38■□□□□ 0.37
PDLIM4-206ENST00000474421 HACD2Q6Y1H2 254 aa17.38■□□□□ 0.37
PDLIM4-206ENST00000474421 MBOAT2Q6ZWT7 520 aa17.38■□□□□ 0.37
PDLIM4-206ENST00000474421 RRM2BQ7LG56 351 aa17.38■□□□□ 0.37
PDLIM4-206ENST00000474421 IGFN1Q86VF2 1251 aa17.38■□□□□ 0.37
PDLIM4-206ENST00000474421 AKR7LQ8NHP1 331 aa17.38■□□□□ 0.37
PDLIM4-206ENST00000474421 WACQ9BTA9 647 aa17.38■□□□□ 0.37
PDLIM4-206ENST00000474421 OR2H1Q9GZK4 316 aa17.38■□□□□ 0.37
PDLIM4-206ENST00000474421 ANKRD19PQ9H560 264 aa17.38■□□□□ 0.37
PDLIM4-206ENST00000474421 NARFLQ9H6Q4 476 aa17.38■□□□□ 0.37
PDLIM4-206ENST00000474421 GRIP1Q9Y3R0 1128 aa17.38■□□□□ 0.37
PDLIM4-206ENST00000474421 SNX13Q9Y5W8 968 aa17.38■□□□□ 0.37
PDLIM4-206ENST00000474421 PLSCR5A0PG75 271 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 H3BSA7 217 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 J3KTA2 159 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 NME4O00746 187 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 FFAR1O14842 300 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 TPD52L2O43399 206 aaKnown RBP17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 AHCYL1O43865 530 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 MSMBP08118 114 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 ANPEPP15144 967 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 LAP3P28838 519 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 LIPAP38571 399 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 MDH1P40925 334 aaKnown RBP17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 CRYBB2P43320 205 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 ARL9Q6T311 187 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 FOXL2NBQ6ZUU3 175 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 SYT9Q86SS6 491 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 OR13C2Q8NGS9 318 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 OR51F2Q8NH61 342 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 TMEM186Q96B77 213 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 HSH2DQ96JZ2 352 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 C19orf24Q9BVV8 132 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 CYSLTR2Q9NS75 346 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 TMEM5Q9Y2B1 443 aa17.37■□□□□ 0.37
PDLIM4-206ENST00000474421 LOC100509620A0A075B734 347 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 A0A087WUU8 490 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 IGHV1-69-2A0A0G2JMI3 117 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 A0A1W2PPL8 197 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 C12orf71A8MTZ7 269 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 XKRYO14609 159 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 TCF21O43680 179 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 CDC14BO60729 498 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 SERPINA1P01009 418 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 GAAP10253 952 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 MSR1P21757 451 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 RPL4P36578 427 aaKnown RBP17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 WNT5AP41221 380 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 GSK3BP49841 420 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 ZNF81P51508 661 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 ARHGDIAP52565 204 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 SCGB2A2Q13296 93 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 MBNL2Q5VZF2 373 aaKnown RBP17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 C8orf82Q6P1X6 216 aaPredicted RBP17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 RINLQ6ZS11 566 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 TMPRSS11FQ6ZWK6 438 aa17.36■□□□□ 0.37
PDLIM4-206ENST00000474421 ZNF101Q8IZC7 436 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms