RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 C3AR1Q16581 482 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 BAK1Q16611 211 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 DDI2Q5TDH0 399 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 SLC18B1Q6NT16 456 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 SFXN4Q6P4A7 337 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 CNIH2Q6PI25 160 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 LRFN4Q6PJG9 635 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 FAM131AQ6UXB0 335 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 ASCL5Q7RTU5 278 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 KRT77Q7Z794 578 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 GGNQ86UU5 652 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 LYSMD2Q8IV50 215 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 DND1Q8IYX4 353 aaKnown RBP5.54□□□□□ -1.52
CLK1-210ENST00000473565 GALNT16Q8N428 558 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 MS4A15Q8N5U1 240 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 ZNF433Q8N7K0 673 aaPredicted RBP5.54□□□□□ -1.52
CLK1-210ENST00000473565 ZNF676Q8N7Q3 588 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 CLEC1AQ8NC01 280 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 DNAAF1Q8NEP3 725 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 NOXO1Q8NFA2 376 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 OR2M7Q8NG81 312 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 SNRNP27Q8WVK2 155 aaKnown RBP5.54□□□□□ -1.52
CLK1-210ENST00000473565 MCHR2Q969V1 340 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 ZNF837Q96EG3 531 aaPredicted RBP5.54□□□□□ -1.52
CLK1-210ENST00000473565 SLC25A44Q96H78 314 aaPredicted RBP5.54□□□□□ -1.52
CLK1-210ENST00000473565 OXGR1Q96P68 337 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 COQ7Q99807 217 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 SLC6A15Q9H2J7 730 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 ZFP64Q9NPA5 681 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 TEKT2Q9UIF3 430 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 ZNF281Q9Y2X9 895 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 LRP12Q9Y561 859 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 RP1L1Q8IWN7 2480 aaPredicted RBP5.54□□□□□ -1.52
CLK1-210ENST00000473565 ACACAQ13085 2346 aa5.54□□□□□ -1.52
CLK1-210ENST00000473565 ZNF726A6NNF4 738 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 TAF4O00268 1085 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 SMAD9O15198 467 aaKnown RBP5.53□□□□□ -1.52
CLK1-210ENST00000473565 ZNHIT1O43257 154 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 LRP3O75074 770 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 IGHG1P01857 330 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 SNRPBP14678 240 aaKnown RBP5.53□□□□□ -1.52
CLK1-210ENST00000473565 SPNP16150 400 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 ATF1P18846 271 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 APEX1P27695 318 aaKnown RBP5.53□□□□□ -1.52
CLK1-210ENST00000473565 NTF4P34130 210 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 THBS2P35442 1172 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 MAGEA5P43359 124 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 MTNR1BP49286 362 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 CLDN12P56749 244 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 RAC1P63000 192 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 AIMP2Q13155 320 aaKnown RBP5.53□□□□□ -1.52
CLK1-210ENST00000473565 HSD17B12Q53GQ0 312 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 Q6ZNX1 250 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 ESPNLQ6ZVH7 1005 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 OR5H6Q8NGV6 325 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 OR5AK2Q8NH90 309 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 C4orf45Q96LM5 186 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 DERL3Q96Q80 235 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 RBP7Q96R05 134 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 SNX18Q96RF0 628 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 GFI1Q99684 422 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 TTYH2Q9BSA4 534 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 MROQ9BYG7 248 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 PALMDQ9NP74 551 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 EMC9Q9Y3B6 208 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 FABP12A6NFH5 140 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 ZNF879B4DU55 563 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.53□□□□□ -1.52
CLK1-210ENST00000473565 PMS2P2O95744 297 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 TACSTD2P09758 323 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 OCM2P0CE71 109 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 OCMP0CE72 109 aaPredicted RBP5.53□□□□□ -1.52
CLK1-210ENST00000473565 ELK1P19419 428 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 CNR1P21554 472 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 NBL1P41271 181 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 NUBP1P53384 320 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 PMP22Q01453 160 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 ZNF45Q02386 682 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 EGR3Q06889 387 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 RSPO4Q2I0M5 234 aaPredicted RBP5.53□□□□□ -1.52
CLK1-210ENST00000473565 TRIM16LQ309B1 348 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 CCDC58Q4VC31 144 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 CEP78Q5JTW2 689 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 HES5Q5TA89 166 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 HBMQ6B0K9 141 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 CFAP77Q6ZQR2 320 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 CREB3L2Q70SY1 520 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 TMPRSS12Q86WS5 348 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 GLB1L2Q8IW92 636 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 ZNF679Q8IYX0 411 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 UBE2J2Q8N2K1 259 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 POC5Q8NA72 575 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 OR9K2Q8NGE7 335 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 OR10S1Q8NGN2 331 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 OR52N5Q8NH56 324 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 ST7LQ8TDW4 575 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 KIAA1143Q96AT1 154 aaPredicted RBP5.53□□□□□ -1.52
CLK1-210ENST00000473565 TRAPPC4Q9Y296 219 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 B3GNT3Q9Y2A9 372 aa5.53□□□□□ -1.52
CLK1-210ENST00000473565 POLR1DQ9Y2S0 133 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms