RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 ZBTB8AQ96BR9 441 aa12.86□□□□□ -0.35
NHLRC3-204ENST00000473371 OR8B4Q96RC9 309 aa12.86□□□□□ -0.35
NHLRC3-204ENST00000473371 FAM60AQ9NP50 221 aa12.86□□□□□ -0.35
NHLRC3-204ENST00000473371 SLC39A1Q9NY26 324 aa12.86□□□□□ -0.35
NHLRC3-204ENST00000473371 GDE1Q9NZC3 331 aa12.86□□□□□ -0.35
NHLRC3-204ENST00000473371 MYEF2Q9P2K5 600 aaKnown RBP12.86□□□□□ -0.35
NHLRC3-204ENST00000473371 CKLFQ9UBR5 152 aa12.86□□□□□ -0.35
NHLRC3-204ENST00000473371 MSRAQ9UJ68 235 aa12.86□□□□□ -0.35
NHLRC3-204ENST00000473371 PURGQ9UJV8 347 aaKnown RBP12.86□□□□□ -0.35
NHLRC3-204ENST00000473371 MRPS33Q9Y291 106 aaKnown RBP12.86□□□□□ -0.35
NHLRC3-204ENST00000473371 OR14I1A6ND48 311 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 SLC25A4P12235 298 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 TOMM20Q15388 145 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 CCDC157Q569K6 752 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 GLYATL3Q5SZD4 288 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 LPCAT3Q6P1A2 487 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 TMEM184AQ6ZMB5 413 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 NDUFAF7Q7L592 441 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 TAF8Q7Z7C8 310 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 OOSP2Q86WS3 158 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 SFTPA2Q8IWL1 248 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 SLC41A2Q96JW4 573 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 SCPEP1Q9HB40 452 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 CPNE7Q9UBL6 633 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 CGGBP1Q9UFW8 167 aaPredicted RBP12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 PLEKHA6Q9Y2H5 1048 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 CHD7Q9P2D1 2997 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 LINC01553A4QN01 128 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 FAM25EA8MYX2 175 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 DISC1C4P0D8 188 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 SIGLEC6O43699 453 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 GPR3P46089 330 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 PPIAP62937 165 aaKnown RBP12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 SNTB1Q13884 538 aaKnown RBP12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 PRAMEF17Q5VTA0 474 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 TMEM225Q6GV28 225 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 ASPHD2Q6ICH7 369 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 FAM166AQ6J272 317 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 ACOT7LQ6ZUV0 252 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 BMFQ96LC9 184 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 TSNAXQ99598 290 aaKnown RBP12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 PIGMQ9H3S5 423 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 MYOZ1Q9NP98 299 aaPredicted RBP12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 TAS2R4Q9NYW5 299 aa12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 FBXO9Q9UK97 447 aaPredicted RBP12.85□□□□□ -0.35
NHLRC3-204ENST00000473371 C11orf98E9PRG8 122 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 H7C2Y5 167 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 XKRYO14609 159 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 GMFGO60234 142 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 OR6A2O95222 327 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 PNPP00491 289 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 CD2P06729 351 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 ZNF735P0CB33 412 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 GDI1P31150 447 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 UBE2IP63279 158 aaKnown RBP12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 NKPD1Q17RQ9 610 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 PAN3Q58A45 887 aaKnown RBP12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 MED25Q71SY5 747 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 PPP1R1CQ8WVI7 109 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 TAAR8Q969N4 342 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 CMKLR1Q99788 373 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 CYB5R1Q9UHQ9 305 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 F5H0A9 414 aaPredicted RBP12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 SPARCP09486 303 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 ATP1B3P54709 279 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 FDX2Q6P4F2 183 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 POMZP3Q6PJE2 187 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 SLC6A7Q99884 636 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 KXD1Q9BQD3 176 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 SLCO5A1Q9H2Y9 848 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 ASF1BQ9NVP2 202 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 C2orf16Q68DN1 1984 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 LOC100509620A0A075B734 347 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 DCDC2BA2VCK2 349 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 RNF222A6NCQ9 220 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 SCDO00767 359 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 SLC25A12O75746 678 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 ATG12O94817 140 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 MAOAP21397 527 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 TACR3P29371 465 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 CD96P40200 585 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 KIR2DL1P43626 348 aaPredicted RBP12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 CAPZA1P52907 286 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 SKP2Q13309 424 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 CCINQ13939 588 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 ALG11Q2TAA5 492 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 TMEM196Q5HYL7 178 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 ZNF679Q8IYX0 411 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 OR1S2Q8NGQ3 325 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 OR13C8Q8NGS7 320 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 ELSPBP1Q96BH3 223 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 PHYHIPLQ96FC7 376 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 CRISPLD2Q9H0B8 497 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 PCDHB10Q9UN67 800 aa12.84□□□□□ -0.35
NHLRC3-204ENST00000473371 OR2AT4A6NND4 320 aa12.83□□□□□ -0.36
NHLRC3-204ENST00000473371 ST6GAL1P15907 406 aa12.83□□□□□ -0.36
NHLRC3-204ENST00000473371 SKP1P63208 163 aa12.83□□□□□ -0.36
NHLRC3-204ENST00000473371 PMPCAQ10713 525 aa12.83□□□□□ -0.36
NHLRC3-204ENST00000473371 SHEQ5VZ18 495 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms