RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 FOXL2NBQ6ZUU3 175 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 PARP8Q8N3A8 854 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 CBR4Q8N4T8 237 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 OR4Q3Q8NH05 313 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 ZNF570Q96NI8 536 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 FOXN4Q96NZ1 517 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 TSSK2Q96PF2 358 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 DDOQ99489 341 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 OBP2BQ9NPH6 170 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 PAPOLBQ9NRJ5 636 aaKnown RBP11.39□□□□□ -0.59
TPM3-216ENST00000473036 KRT84Q9NSB2 600 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 BEX4Q9NWD9 120 aaPredicted RBP11.39□□□□□ -0.59
TPM3-216ENST00000473036 IL20Q9NYY1 176 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 VSX1Q9NZR4 365 aaPredicted RBP11.39□□□□□ -0.59
TPM3-216ENST00000473036 REV1Q9UBZ9 1251 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 NKX1-2Q9UD57 310 aaPredicted RBP11.39□□□□□ -0.59
TPM3-216ENST00000473036 ZANQ9Y493 2812 aa11.39□□□□□ -0.59
TPM3-216ENST00000473036 BHLHE40O14503 412 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 HS3ST1O14792 307 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 SOX14O95416 240 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 GPANK1O95872 356 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 WNT11O96014 354 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 SOD3P08294 240 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 MMP7P09237 267 aaPredicted RBP11.38□□□□□ -0.59
TPM3-216ENST00000473036 DANCRP0C864 163 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 CBR1P16152 277 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 HIST1H1CP16403 213 aaKnown RBP11.38□□□□□ -0.59
TPM3-216ENST00000473036 ZNF14P17017 642 aaPredicted RBP11.38□□□□□ -0.59
TPM3-216ENST00000473036 IGFBP5P24593 272 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 PTAFRP25105 342 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 UBE2NP61088 152 aaKnown RBP11.38□□□□□ -0.59
TPM3-216ENST00000473036 PPP2R2BQ00005 443 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 KRR1Q13601 381 aaKnown RBP11.38□□□□□ -0.59
TPM3-216ENST00000473036 CLEC12AQ5QGZ9 265 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 THEM4Q5T1C6 240 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 KDM4DQ6B0I6 523 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 UGT2A3Q6UWM9 527 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 TMEM108Q6UXF1 575 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 CLEC9AQ6UXN8 241 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 RASSF6Q6ZTQ3 369 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 FAM169BQ8N8A8 192 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 SPATA3Q8NHX4 192 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 ZNRF4Q8WWF5 429 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 ERMAPQ96PL5 475 aaPredicted RBP11.38□□□□□ -0.59
TPM3-216ENST00000473036 SLC38A2Q96QD8 506 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 PRRG3Q9BZD7 231 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 SYT4Q9H2B2 425 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 SMURF2Q9HAU4 748 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 NGBQ9NPG2 151 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 GRHPRQ9UBQ7 328 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 CDH10Q9Y6N8 788 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 ARFGEF3Q5TH69 2177 aa11.38□□□□□ -0.59
TPM3-216ENST00000473036 A6NIZ1 184 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 ATP6V1G2-DDX39BF2Z307 99 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 ARPC3O15145 178 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 CD8AP01732 235 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 ALPLP05186 524 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 CD79AP11912 226 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 OSMP13725 252 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 APEHP13798 732 aaKnown RBP11.37□□□□□ -0.59
TPM3-216ENST00000473036 CAPZA2P47755 286 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 GIPRP48546 466 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 IDH3GP51553 393 aaPredicted RBP11.37□□□□□ -0.59
TPM3-216ENST00000473036 RAP1BP61224 184 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 RAP1AP62834 184 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 MRPS34P82930 218 aaKnown RBP11.37□□□□□ -0.59
TPM3-216ENST00000473036 NAAAQ02083 359 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 HGFACQ04756 655 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 SLC35F1Q5T1Q4 408 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 FAM205BPQ63HN1 556 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 GPR139Q6DWJ6 353 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 SSX8Q7RTT4 187 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 HDDC2Q7Z4H3 204 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 LRRC18Q8N456 261 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 OR52L1Q8NGH7 329 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 OR4K13Q8NH42 304 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 FBXO17Q96EF6 278 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 NMNAT3Q96T66 252 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 IFT27Q9BW83 186 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 NUAK2Q9H093 628 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 MOKQ9UQ07 419 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 BAIAP2Q9UQB8 552 aa11.37□□□□□ -0.59
TPM3-216ENST00000473036 COL6A5A8TX70 2615 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 OR6C68A6NDL8 312 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 EI24O14681 340 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 IDH3BO43837 385 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 MPZL1O95297 269 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 OR8G3PP0DMU2 310 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 LAP3P28838 519 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 SLC6A6P31641 620 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 CDH11P55287 796 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 RAB1AP62820 205 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 ENDOGQ14249 297 aaKnown RBP11.36□□□□□ -0.59
TPM3-216ENST00000473036 RAB39AQ14964 217 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 MSMPQ1L6U9 139 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 GSG1Q2KHT4 349 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 C3orf36Q3SXR2 165 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 C1QTNF12Q5T7M4 302 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 TTC23Q5W5X9 447 aa11.36□□□□□ -0.59
TPM3-216ENST00000473036 LPCAT4Q643R3 524 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms