RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 TRBV2A0A0J9YWF9 115 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 A0A1W2PPL8 197 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 GPR171O14626 319 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 TFECO14948 347 aaPredicted RBP8.32□□□□□ -1.08
VPS52-216ENST00000471309 SLC43A1O75387 559 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 MPZL1O95297 269 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 SYNGR4O95473 234 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 SERPINA3P01011 423 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 QDPRP09417 244 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 CPN1P15169 458 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 EDNRAP25101 427 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 SOX6P35712 828 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 SELENOPP49908 381 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 PMP22Q01453 160 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 SLC3A1Q07837 685 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 EIF2B1Q14232 305 aaKnown RBP8.32□□□□□ -1.08
VPS52-216ENST00000471309 ZNF169Q14929 603 aaPredicted RBP8.32□□□□□ -1.08
VPS52-216ENST00000471309 ZNF404Q494X3 552 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 LIPNQ5VXI9 398 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 C22orf42Q6IC83 251 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 FDX2Q6P4F2 183 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 LRFN4Q6PJG9 635 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 LRRC69Q6ZNQ3 347 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 TMEM91Q6ZNR0 172 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.32□□□□□ -1.08
VPS52-216ENST00000471309 SPACA3Q8IXA5 215 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 C20orf196Q8IYI0 205 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 ZNF679Q8IYX0 411 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 YIPF7Q8N8F6 280 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 MCFD2Q8NI22 146 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 ST7LQ8TDW4 575 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 THEM6Q8WUY1 208 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 C11orf40Q8WZ69 217 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 ROBO4Q8WZ75 1007 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 NSMAFQ92636 917 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 DCLRE1CQ96SD1 692 aaKnown RBP8.32□□□□□ -1.08
VPS52-216ENST00000471309 MROQ9BYG7 248 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 NXF2Q9GZY0 626 aaKnown RBP8.32□□□□□ -1.08
VPS52-216ENST00000471309 CCDC86Q9H6F5 360 aaKnown RBP8.32□□□□□ -1.08
VPS52-216ENST00000471309 RNF122Q9H9V4 155 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 POLE4Q9NR33 117 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 GALNT8Q9NY28 637 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 SLCO1C1Q9NYB5 712 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 CYB5R1Q9UHQ9 305 aa8.32□□□□□ -1.08
VPS52-216ENST00000471309 ING1Q9UK53 422 aaPredicted RBP8.32□□□□□ -1.08
VPS52-216ENST00000471309 CACNA1GO43497 2377 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 CD8B2A6NJW9 211 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 PSMD9O00233 223 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 TMCC2O75069 709 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 ZNF254O75437 659 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 ITGB2P05107 769 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 CD8BP10966 210 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 RPS19P39019 145 aaKnown RBP8.31□□□□□ -1.08
VPS52-216ENST00000471309 PSMB10P40306 273 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 EIF2S3P41091 472 aaKnown RBP8.31□□□□□ -1.08
VPS52-216ENST00000471309 ZNF84P51523 738 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 NANOS3P60323 173 aaKnown RBP8.31□□□□□ -1.08
VPS52-216ENST00000471309 LSM6P62312 80 aaKnown RBP8.31□□□□□ -1.08
VPS52-216ENST00000471309 SRYQ05066 204 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 RASGEF1BQ0VAM2 473 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 INAQ16352 499 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 PHYHD1Q5SRE7 291 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 RIPPLY2Q5TAB7 128 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 OTPQ5XKR4 325 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 DEGS2Q6QHC5 323 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 PAMR1Q6UXH9 720 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 LRRN1Q6UXK5 716 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 Q6ZS92 163 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 AAED1Q7RTV5 226 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 ABHD4Q8TB40 342 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 ABHD3Q8WU67 409 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 RNF133Q8WVZ7 376 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 HSD17B8Q92506 261 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 GHSRQ92847 366 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 SLC25A46Q96AG3 418 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 WDYHV1Q96HA8 205 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 CDADC1Q9BWV3 514 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 HDHD5Q9BXW7 423 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 ULBP2Q9BZM5 246 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 PRDM14Q9GZV8 571 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 DEFB127Q9H1M4 99 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 MMP27Q9H306 513 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 NELFAQ9H3P2 528 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 LDAHQ9H6V9 325 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 EXO5Q9H790 373 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 EMC3Q9P0I2 261 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 SPRR3Q9UBC9 169 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 LRP12Q9Y561 859 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 EPG5Q9HCE0 2579 aa8.31□□□□□ -1.08
VPS52-216ENST00000471309 TNRC6AQ8NDV7 1962 aaKnown RBP8.3□□□□□ -1.08
VPS52-216ENST00000471309 A0A075B6Q4 140 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 ARPC4-TTLL3A0A0A6YYG9 625 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 A0A1B0GVC2 190 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 TMEM212A6NML5 194 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 ZNF724A8MTY0 619 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 AQP7O14520 342 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 DHHO43323 396 aa8.3□□□□□ -1.08
VPS52-216ENST00000471309 GATBO75879 557 aaKnown RBP8.3□□□□□ -1.08
VPS52-216ENST00000471309 RPP14O95059 124 aaKnown RBP8.3□□□□□ -1.08
VPS52-216ENST00000471309 CDRT1O95170 752 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms