RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 TPBGQ13641 420 aa13.37□□□□□ -0.27
COL4A5-203ENST00000470339 HSPB2Q16082 182 aa13.37□□□□□ -0.27
COL4A5-203ENST00000470339 ZNF684Q5T5D7 378 aa13.37□□□□□ -0.27
COL4A5-203ENST00000470339 ANKRD13BQ86YJ7 626 aa13.37□□□□□ -0.27
COL4A5-203ENST00000470339 OR10H5Q8NGA6 315 aa13.37□□□□□ -0.27
COL4A5-203ENST00000470339 OR5M9Q8NGP3 310 aa13.37□□□□□ -0.27
COL4A5-203ENST00000470339 FAM57AQ8TBR7 257 aa13.37□□□□□ -0.27
COL4A5-203ENST00000470339 SNX33Q8WV41 574 aa13.37□□□□□ -0.27
COL4A5-203ENST00000470339 SPRYD4Q8WW59 207 aaPredicted RBP13.37□□□□□ -0.27
COL4A5-203ENST00000470339 GATAD2BQ8WXI9 593 aa13.37□□□□□ -0.27
COL4A5-203ENST00000470339 C11orf40Q8WZ69 217 aa13.37□□□□□ -0.27
COL4A5-203ENST00000470339 OPALINQ96PE5 141 aa13.37□□□□□ -0.27
COL4A5-203ENST00000470339 BCL7BQ9BQE9 202 aa13.37□□□□□ -0.27
COL4A5-203ENST00000470339 TTYH2Q9BSA4 534 aa13.37□□□□□ -0.27
COL4A5-203ENST00000470339 POLE4Q9NR33 117 aa13.37□□□□□ -0.27
COL4A5-203ENST00000470339 ZMIZ1Q9ULJ6 1067 aa13.37□□□□□ -0.27
COL4A5-203ENST00000470339 COPS3Q9UNS2 423 aa13.37□□□□□ -0.27
COL4A5-203ENST00000470339 A0A1W2PPL8 197 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 FIGNL2A6NMB9 653 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 CCRL2O00421 344 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 UPK3AO75631 287 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 MPZL1O95297 269 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 HSMCR30P0CW71 290 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 AGTR1P30556 359 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 LIPAP38571 399 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 TAS2R43P59537 309 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 ROM1Q03395 351 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 GUSBP1Q15486 140 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 NRN1LQ496H8 165 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 KCTD18Q6PI47 426 aaPredicted RBP13.36□□□□□ -0.27
COL4A5-203ENST00000470339 DEGS2Q6QHC5 323 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 C19orf48Q6RUI8 117 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 RHOUQ7L0Q8 258 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 VASH1Q7L8A9 365 aaPredicted RBP13.36□□□□□ -0.27
COL4A5-203ENST00000470339 SSX6Q7RTT6 188 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 SMAP2Q8WU79 429 aaPredicted RBP13.36□□□□□ -0.27
COL4A5-203ENST00000470339 APH1AQ96BI3 265 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 SNRNP40Q96DI7 357 aaKnown RBP13.36□□□□□ -0.27
COL4A5-203ENST00000470339 WBP1Q96G27 269 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 FUNDC2Q9BWH2 189 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 CDADC1Q9BWV3 514 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 RBM24Q9BX46 236 aaKnown RBP13.36□□□□□ -0.27
COL4A5-203ENST00000470339 NELFAQ9H3P2 528 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 ISG20L2Q9H9L3 353 aaKnown RBP13.36□□□□□ -0.27
COL4A5-203ENST00000470339 SEC61A2Q9H9S3 476 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 GPR35Q9HC97 309 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 CYB5R1Q9UHQ9 305 aa13.36□□□□□ -0.27
COL4A5-203ENST00000470339 MAP1BP46821 2468 aaKnown RBP13.36□□□□□ -0.27
COL4A5-203ENST00000470339 USP24Q9UPU5 2620 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 CACNA1CQ13936 2221 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 MBD3L4A6NDZ8 208 aaPredicted RBP13.35□□□□□ -0.27
COL4A5-203ENST00000470339 MBD3L3A6NE82 208 aaPredicted RBP13.35□□□□□ -0.27
COL4A5-203ENST00000470339 MBD3L5A6NJ08 208 aaPredicted RBP13.35□□□□□ -0.27
COL4A5-203ENST00000470339 METTL15A6NJ78 407 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 J3QLW9 94 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 ERVH48-1M5A8F1 160 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 CRHP06850 196 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 SPARCP09486 303 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 CD36P16671 472 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 ZNF19P17023 458 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 CD53P19397 219 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 MSR1P21757 451 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 TGFBR2P37173 567 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 CD79BP40259 229 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 GBX2P52951 348 aaPredicted RBP13.35□□□□□ -0.27
COL4A5-203ENST00000470339 OR12D2P58182 307 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 MEP1BQ16820 701 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 EIF2S3LQ2VIR3 472 aaKnown RBP13.35□□□□□ -0.27
COL4A5-203ENST00000470339 CCDC58Q4VC31 144 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 TSPO2Q5TGU0 170 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 FAM27BQ5VT28 67 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 GPR107Q5VW38 600 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 FOXB2Q5VYV0 432 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 ZNF585AQ6P3V2 769 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 PLXDC2Q6UX71 529 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 ABHD12BQ7Z5M8 362 aaPredicted RBP13.35□□□□□ -0.27
COL4A5-203ENST00000470339 ZGRF1Q86YA3 2104 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 CLVS1Q8IUQ0 354 aaPredicted RBP13.35□□□□□ -0.27
COL4A5-203ENST00000470339 ZNF100Q8IYN0 542 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 MBD3L2Q8NHZ7 208 aaPredicted RBP13.35□□□□□ -0.27
COL4A5-203ENST00000470339 THEM6Q8WUY1 208 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 C4orf36Q96KX1 117 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 ZFP3Q96NJ6 502 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 FOXN4Q96NZ1 517 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 DOK1Q99704 481 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 WACQ9BTA9 647 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 SIAEQ9HAT2 523 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 CRLF2Q9HC73 371 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 TRIM36Q9NQ86 728 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 CLEC4AQ9UMR7 237 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 ZNF835Q9Y2P0 537 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 KLHDC2Q9Y2U9 406 aa13.35□□□□□ -0.27
COL4A5-203ENST00000470339 ZNF254O75437 659 aa13.34□□□□□ -0.27
COL4A5-203ENST00000470339 KRT33AO76009 404 aa13.34□□□□□ -0.27
COL4A5-203ENST00000470339 CNOT4O95628 575 aaKnown RBP13.34□□□□□ -0.27
COL4A5-203ENST00000470339 KRT8P05787 483 aa13.34□□□□□ -0.27
COL4A5-203ENST00000470339 TPOP07202 933 aa13.34□□□□□ -0.27
COL4A5-203ENST00000470339 CDAP32320 146 aa13.34□□□□□ -0.27
COL4A5-203ENST00000470339 OR3A2P47893 321 aa13.34□□□□□ -0.27
COL4A5-203ENST00000470339 TGM4P49221 684 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms