RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 FAHD2BQ6P2I3 314 aaPredicted RBP14.89□□□□□ -0.03
COL7A1-208ENST00000470076 SLC25A47Q6Q0C1 308 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 USP51Q70EK9 711 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 ALDH16A1Q8IZ83 802 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 ZNF101Q8IZC7 436 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 NSMAFQ92636 917 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 BPIFA2Q96DR5 249 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 FAHD2AQ96GK7 314 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 TIMD4Q96H15 378 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 PRRC1Q96M27 445 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 RBP7Q96R05 134 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 SAR1AQ9NR31 198 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 GID8Q9NWU2 228 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 LOC100509620A0A075B734 347 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 PLSCR5A0PG75 271 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 C5orf49A4QMS7 147 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 PIP5K1CO60331 668 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 VENTXO95231 258 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 IGHMP01871 453 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 IFI30P13284 250 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 WNT5AP41221 380 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 GUCA1AP43080 201 aaPredicted RBP14.88□□□□□ -0.03
COL7A1-208ENST00000470076 ARFIP2P53365 341 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 RPL27P61353 136 aaKnown RBP14.88□□□□□ -0.03
COL7A1-208ENST00000470076 ERVK-25P63136 954 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 SELENOWP63302 87 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 PSG4Q00888 419 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 TOP3AQ13472 1001 aaPredicted RBP14.88□□□□□ -0.03
COL7A1-208ENST00000470076 TSTQ16762 297 aaKnown RBP14.88□□□□□ -0.03
COL7A1-208ENST00000470076 FAM205BPQ63HN1 556 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.88□□□□□ -0.03
COL7A1-208ENST00000470076 SEMA6DQ8NFY4 1073 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 OR2T12Q8NG77 320 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 AKR7LQ8NHP1 331 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 ZNF418Q8TF45 676 aaPredicted RBP14.88□□□□□ -0.03
COL7A1-208ENST00000470076 LZICQ8WZA0 190 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 RAB1CQ92928 201 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 ELMOD3Q96FG2 381 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 MARS2Q96GW9 593 aaKnown RBP14.88□□□□□ -0.03
COL7A1-208ENST00000470076 TPD52L3Q96J77 140 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 G6PC2Q9NQR9 355 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 CGGBP1Q9UFW8 167 aaPredicted RBP14.88□□□□□ -0.03
COL7A1-208ENST00000470076 A4GNTQ9UNA3 340 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 WIPI2Q9Y4P8 454 aa14.88□□□□□ -0.03
COL7A1-208ENST00000470076 LOC100653049A0A140TA62 436 aa14.87□□□□□ -0.03
COL7A1-208ENST00000470076 H3BSA7 217 aa14.87□□□□□ -0.03
COL7A1-208ENST00000470076 ICMTO60725 284 aa14.87□□□□□ -0.03
COL7A1-208ENST00000470076 DEAF1O75398 565 aaPredicted RBP14.87□□□□□ -0.03
COL7A1-208ENST00000470076 KRT34O76011 436 aa14.87□□□□□ -0.03
COL7A1-208ENST00000470076 MPZL1O95297 269 aa14.87□□□□□ -0.03
COL7A1-208ENST00000470076 CST2P09228 141 aa14.87□□□□□ -0.03
COL7A1-208ENST00000470076 LIPAP38571 399 aa14.87□□□□□ -0.03
COL7A1-208ENST00000470076 MMP15P51511 669 aa14.87□□□□□ -0.03
COL7A1-208ENST00000470076 PCBD1P61457 104 aa14.87□□□□□ -0.03
COL7A1-208ENST00000470076 ANKDD1AQ495B1 522 aa14.87□□□□□ -0.03
COL7A1-208ENST00000470076 SPATA46Q5T0L3 261 aa14.87□□□□□ -0.03
COL7A1-208ENST00000470076 MBNL2Q5VZF2 373 aaKnown RBP14.87□□□□□ -0.03
COL7A1-208ENST00000470076 SLC25A40Q8TBP6 338 aa14.87□□□□□ -0.03
COL7A1-208ENST00000470076 KLF14Q8TD94 323 aaPredicted RBP14.87□□□□□ -0.03
COL7A1-208ENST00000470076 IPCEF1Q8WWN9 437 aaPredicted RBP14.87□□□□□ -0.03
COL7A1-208ENST00000470076 GTF3AQ92664 365 aaKnown RBP14.87□□□□□ -0.03
COL7A1-208ENST00000470076 OR2H1Q9GZK4 316 aa14.87□□□□□ -0.03
COL7A1-208ENST00000470076 CYSLTR2Q9NS75 346 aa14.87□□□□□ -0.03
COL7A1-208ENST00000470076 TIMM10BQ9Y5J6 103 aa14.87□□□□□ -0.03
COL7A1-208ENST00000470076 A0A0G2JMP0 313 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 A0A0X1KG70 313 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 ELOVL7A1L3X0 281 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 A6NIZ1 184 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 PLPP2O43688 288 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 IGHV1-46P01743 117 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 IGHV2-5P01817 119 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 ADH4P08319 380 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 H2AFXP16104 143 aaPredicted RBP14.86□□□□□ -0.03
COL7A1-208ENST00000470076 LAP3P28838 519 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 MPV17P39210 176 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 CTXN1P60606 82 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 RAP1BP61224 184 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 RAP1AP62834 184 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 SLC3A1Q07837 685 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 C12orf54Q6X4T0 127 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 FOXL2NBQ6ZUU3 175 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 MICU2Q8IYU8 434 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 OR4M2Q8NGB6 313 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 OR2J1Q9GZK6 312 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 EGLN1Q9GZT9 426 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 WNT5BQ9H1J7 359 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 AP3M1Q9Y2T2 418 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 CACNG2Q9Y698 323 aa14.86□□□□□ -0.03
COL7A1-208ENST00000470076 J3QLI3 93 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 SPRY3O43610 288 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 MAKP20794 623 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 EPHA1P21709 976 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 PPP1CBP62140 327 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 TRAM2Q15035 370 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 ZMAT1Q5H9K5 638 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 ARL9Q6T311 187 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 THSD4Q6ZMP0 1018 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 C1orf229Q6ZS94 237 aaPredicted RBP14.85□□□□□ -0.03
COL7A1-208ENST00000470076 RFPL4BQ6ZWI9 263 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 USP43Q70EL4 1123 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms