RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 SLC16A6O15403 523 aa12.91□□□□□ -0.34
COL9A3-209ENST00000469852 SIAH2O43255 324 aa12.91□□□□□ -0.34
COL9A3-209ENST00000469852 SLC2A5P22732 501 aa12.91□□□□□ -0.34
COL9A3-209ENST00000469852 ADARB1P78563 741 aaKnown RBP12.91□□□□□ -0.34
COL9A3-209ENST00000469852 ENDOGQ14249 297 aaKnown RBP12.91□□□□□ -0.34
COL9A3-209ENST00000469852 PPA1Q15181 289 aa12.91□□□□□ -0.34
COL9A3-209ENST00000469852 SP5Q6BEB4 398 aaPredicted RBP12.91□□□□□ -0.34
COL9A3-209ENST00000469852 DNM1P34Q6PK57 102 aa12.91□□□□□ -0.34
COL9A3-209ENST00000469852 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.91□□□□□ -0.34
COL9A3-209ENST00000469852 MYPOPQ86VE0 399 aaPredicted RBP12.91□□□□□ -0.34
COL9A3-209ENST00000469852 WFDC8Q8IUA0 241 aa12.91□□□□□ -0.34
COL9A3-209ENST00000469852 GLB1L2Q8IW92 636 aa12.91□□□□□ -0.34
COL9A3-209ENST00000469852 C17orf78Q8N4C9 275 aa12.91□□□□□ -0.34
COL9A3-209ENST00000469852 SLC26A10Q8NG04 563 aa12.91□□□□□ -0.34
COL9A3-209ENST00000469852 OR2T4Q8NH00 348 aa12.91□□□□□ -0.34
COL9A3-209ENST00000469852 CYGBQ8WWM9 190 aa12.91□□□□□ -0.34
COL9A3-209ENST00000469852 C11orf40Q8WZ69 217 aa12.91□□□□□ -0.34
COL9A3-209ENST00000469852 FBXO17Q96EF6 278 aa12.91□□□□□ -0.34
COL9A3-209ENST00000469852 ZNF416Q9BWM5 594 aa12.91□□□□□ -0.34
COL9A3-209ENST00000469852 SIAEQ9HAT2 523 aa12.91□□□□□ -0.34
COL9A3-209ENST00000469852 MRPL22Q9NWU5 206 aaKnown RBP12.91□□□□□ -0.34
COL9A3-209ENST00000469852 B3GNT2Q9NY97 397 aa12.91□□□□□ -0.34
COL9A3-209ENST00000469852 ITPR2Q14571 2701 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 MYO9AB2RTY4 2548 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 CCDC182A6NF36 153 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 OR8G3PP0DMU2 310 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 PPP3CBP16298 524 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 MSR1P21757 451 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 PAICSP22234 425 aaKnown RBP12.9□□□□□ -0.34
COL9A3-209ENST00000469852 KIR2DL3P43628 341 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 CAPZA2P47755 286 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 CDC42P60953 191 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 PIGFQ07326 219 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 KLHL12Q53G59 568 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 FAM27BQ5VT28 67 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 AADACL4Q5VUY2 407 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 IZUMO2Q6UXV1 221 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 MDP1Q86V88 176 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 ENTHD1Q8IYW4 607 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 ZNF511Q8NB15 262 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 HSD17B8Q92506 261 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 ADI1Q9BV57 179 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 TEX12Q9BXU0 123 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 PRRG3Q9BZD7 231 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 NDRG3Q9UGV2 375 aa12.9□□□□□ -0.34
COL9A3-209ENST00000469852 PKDREJQ9NTG1 2253 aa12.9□□□□□ -0.35
COL9A3-209ENST00000469852 HRNRQ86YZ3 2850 aaPredicted RBP12.89□□□□□ -0.35
COL9A3-209ENST00000469852 CELA3BP08861 270 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 MMP7P09237 267 aaPredicted RBP12.89□□□□□ -0.35
COL9A3-209ENST00000469852 GNAO1P09471 354 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 CD79AP11912 226 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 GABRB1P18505 474 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 NPR2P20594 1047 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 HOXC12P31275 282 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 RPS27P42677 84 aaKnown RBP12.89□□□□□ -0.35
COL9A3-209ENST00000469852 ZNF83P51522 516 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 UBE2NP61088 152 aaKnown RBP12.89□□□□□ -0.35
COL9A3-209ENST00000469852 HSF2Q03933 536 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 GLO1Q04760 184 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 APOFQ13790 326 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 KEAP1Q14145 624 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 KCNMB1Q16558 191 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 NRN1LQ496H8 165 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 C6orf52Q5T4I8 152 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 SLC16A14Q7RTX9 510 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 P2RY8Q86VZ1 359 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 DHRSXQ8N5I4 330 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 ZNF555Q8NEP9 628 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 OR8J1Q8NGP2 316 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 OR6K6Q8NGW6 343 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 ZMYND19Q96E35 227 aaPredicted RBP12.89□□□□□ -0.35
COL9A3-209ENST00000469852 ZNF75AQ96N20 296 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 SPOCK3Q9BQ16 436 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 VCXQ9H320 206 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 WDR76Q9H967 626 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 RASSF1Q9NS23 344 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 IMPAD1Q9NX62 359 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 DNAJC27Q9NZQ0 273 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 AMDHD2Q9Y303 409 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 COMMD3-BMI1R4GMX3 469 aa12.89□□□□□ -0.35
COL9A3-209ENST00000469852 DCHS2Q6V1P9 2916 aa12.88□□□□□ -0.35
COL9A3-209ENST00000469852 GLCEO94923 617 aa12.88□□□□□ -0.35
COL9A3-209ENST00000469852 FARS2O95363 451 aaKnown RBP12.88□□□□□ -0.35
COL9A3-209ENST00000469852 HLA-DQA2P01906 255 aa12.88□□□□□ -0.35
COL9A3-209ENST00000469852 CST2P09228 141 aa12.88□□□□□ -0.35
COL9A3-209ENST00000469852 EPXP11678 715 aa12.88□□□□□ -0.35
COL9A3-209ENST00000469852 HOXB1P14653 301 aaPredicted RBP12.88□□□□□ -0.35
COL9A3-209ENST00000469852 ZNF32P17041 273 aa12.88□□□□□ -0.35
COL9A3-209ENST00000469852 CAPGP40121 348 aa12.88□□□□□ -0.35
COL9A3-209ENST00000469852 TEKQ02763 1124 aa12.88□□□□□ -0.35
COL9A3-209ENST00000469852 ZNF691Q5VV52 312 aa12.88□□□□□ -0.35
COL9A3-209ENST00000469852 LINC00346Q8IVM7 164 aa12.88□□□□□ -0.35
COL9A3-209ENST00000469852 SMAP2Q8WU79 429 aaPredicted RBP12.88□□□□□ -0.35
COL9A3-209ENST00000469852 APH1BQ8WW43 257 aa12.88□□□□□ -0.35
COL9A3-209ENST00000469852 TFAP2CQ92754 450 aa12.88□□□□□ -0.35
COL9A3-209ENST00000469852 MUCL1Q96DR8 90 aa12.88□□□□□ -0.35
COL9A3-209ENST00000469852 MS4A3Q96HJ5 214 aa12.88□□□□□ -0.35
COL9A3-209ENST00000469852 ZNF582Q96NG8 517 aaPredicted RBP12.88□□□□□ -0.35
COL9A3-209ENST00000469852 DACH2Q96NX9 599 aa12.88□□□□□ -0.35
COL9A3-209ENST00000469852 LHFPL6Q9Y693 200 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms