RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 ABHD6Q9BV23 337 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 DEPPQ9NTK1 212 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 DAPK2Q9UIK4 370 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 RCE1Q9Y256 329 aa8.33□□□□□ -1.08
SMC1A-205ENST00000469129 A0A0J9YW62 118 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 PRR32B1ATL7 298 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 PSMD9O00233 223 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 CTDSP2O14595 271 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 TNFSF11O14788 317 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 MAGEB4O15481 346 aaPredicted RBP8.32□□□□□ -1.08
SMC1A-205ENST00000469129 GPANK1O95872 356 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 OPN1LWP04000 364 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 RAF1P04049 648 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 GUCA1AP43080 201 aaPredicted RBP8.32□□□□□ -1.08
SMC1A-205ENST00000469129 CD97P48960 835 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 PLGLB1Q02325 96 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 FOXO1Q12778 655 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 CAMK2DQ13557 499 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 KCNMB1Q16558 191 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 HIST3H3Q16695 136 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 TRIM16LQ309B1 348 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 WIPI1Q5MNZ9 446 aaPredicted RBP8.32□□□□□ -1.08
SMC1A-205ENST00000469129 C10orf128Q5T292 105 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 ABLIM2Q6H8Q1 611 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 SLC25A25Q6KCM7 469 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 SFXN4Q6P4A7 337 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 SLC25A47Q6Q0C1 308 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 KLHL24Q6TFL4 600 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 LRRN1Q6UXK5 716 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 UNQ9370/PRO34162Q6UXP9 181 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 LINC00696Q6ZRV3 163 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.32□□□□□ -1.08
SMC1A-205ENST00000469129 GGNQ86UU5 652 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 MEIOBQ8N635 442 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 MDS2Q8NDY4 140 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 OR6N1Q8NGY5 312 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 OR2AJ1Q8NGZ0 328 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 OR2G2Q8NGZ5 317 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 GPR148Q8TDV2 347 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 TSEN15Q8WW01 171 aaKnown RBP8.32□□□□□ -1.08
SMC1A-205ENST00000469129 DIRAS2Q96HU8 199 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 SIGLEC12Q96PQ1 595 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 OR14A2Q96R54 314 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 ATF6BQ99941 703 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 PDCD1LG2Q9BQ51 273 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 EMC6Q9BV81 110 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 NIPAL2Q9H841 368 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 MOB1AQ9H8S9 216 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 ELOVL3Q9HB03 270 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 ABCB9Q9NP78 766 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 B3GAT2Q9NPZ5 323 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 PAQR5Q9NXK6 330 aaPredicted RBP8.32□□□□□ -1.08
SMC1A-205ENST00000469129 SLCO1C1Q9NYB5 712 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 ABRACLQ9P1F3 81 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 RABL2AQ9UBK7 228 aaPredicted RBP8.32□□□□□ -1.08
SMC1A-205ENST00000469129 RABL2BQ9UNT1 228 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 UGT2A1Q9Y4X1 527 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 LRP12Q9Y561 859 aa8.32□□□□□ -1.08
SMC1A-205ENST00000469129 KNTC1P50748 2209 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 MED13Q9UHV7 2174 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 AHCTF1Q8WYP5 2266 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 TRBV5-5A0A0J9YX44 114 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 SHISA3A0PJX4 238 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 OR4C45A6NMZ5 311 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 ZNF891A8MT65 544 aaPredicted RBP8.31□□□□□ -1.08
SMC1A-205ENST00000469129 NOTOA8MTQ0 251 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 ZNF814B7Z6K7 855 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 ZNF878C9JN71 531 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 GPR171O14626 319 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 SMAD9O15198 467 aaKnown RBP8.31□□□□□ -1.08
SMC1A-205ENST00000469129 SLC43A1O75387 559 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 ZFPL1O95159 310 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 CD2P06729 351 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 SP1P08047 785 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 H2BFMP0C1H6 154 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 OCM2P0CE71 109 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 UBCP0CG48 685 aaKnown RBP8.31□□□□□ -1.08
SMC1A-205ENST00000469129 DCTDP32321 178 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 TALDO1P37837 337 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 RPS27P42677 84 aaKnown RBP8.31□□□□□ -1.08
SMC1A-205ENST00000469129 MEOX1P50221 254 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 ZNF84P51523 738 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 ZNF133P52736 654 aaPredicted RBP8.31□□□□□ -1.08
SMC1A-205ENST00000469129 SUCLG1P53597 346 aaKnown RBP8.31□□□□□ -1.08
SMC1A-205ENST00000469129 GFRA1P56159 465 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 CARD18P57730 90 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 NANOS3P60323 173 aaKnown RBP8.31□□□□□ -1.08
SMC1A-205ENST00000469129 RPS11P62280 158 aaKnown RBP eCLIP8.31□□□□□ -1.08
SMC1A-205ENST00000469129 ARG2P78540 354 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 FOXC1Q12948 553 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 INSL4Q14641 139 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 RTP5Q14D33 572 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 ETFDHQ16134 617 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 HYAL4Q2M3T9 481 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 IDNKQ5T6J7 187 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 CARD17Q5XLA6 110 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 SPINK14Q6IE38 97 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 OR7E24Q6IFN5 339 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 XKRXQ6PP77 449 aa8.31□□□□□ -1.08
SMC1A-205ENST00000469129 FAM131AQ6UXB0 335 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms