RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 FLVCR1Q9Y5Y0 555 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 KIAA1549Q9HCM3 1950 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 ZNF716A6NP11 495 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 CYTIPO60759 359 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 AQP8O94778 261 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 ABHD16AO95870 558 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 SELENOPP49908 381 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 RASGEF1BQ0VAM2 473 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 KRT77Q7Z794 578 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 TMEM123Q8N131 208 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 ABHD4Q8TB40 342 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 INTS12Q96CB8 462 aaKnown RBP16.84■□□□□ 0.29
SMC4-209ENST00000468653 MROQ9BYG7 248 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 ZDHHC11Q9H8X9 412 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 HSPB2A8KAH6 182 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 UPK3AO75631 287 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 ZNF432O94892 652 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 IL1AP01583 271 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 CD1AP06126 327 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 ZNF24P17028 368 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 CDAP32320 146 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 MXD1Q05195 221 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 HSPB2Q16082 182 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 PCK2Q16822 640 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 ZNF404Q494X3 552 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 LRRN1Q6UXK5 716 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 TMEM91Q6ZNR0 172 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 SPATC1Q76KD6 591 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 CHMP1BQ7LBR1 199 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 LINC00346Q8IVM7 164 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 ZNF679Q8IYX0 411 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 OR52N5Q8NH56 324 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 ELOVL3Q9HB03 270 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 RCE1Q9Y256 329 aa16.83■□□□□ 0.28
SMC4-209ENST00000468653 SERPINA3P01011 423 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 SDC2P34741 201 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 GUCA1AP43080 201 aaPredicted RBP16.82■□□□□ 0.28
SMC4-209ENST00000468653 ROM1Q03395 351 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 AAED1Q7RTV5 226 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 DCXRQ7Z4W1 244 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 ABHD3Q8WU67 409 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 PRRG4Q9BZD6 226 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 TPK1Q9H3S4 243 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 MCTS1Q9ULC4 181 aaKnown RBP16.82■□□□□ 0.28
SMC4-209ENST00000468653 POLR1DQ9Y2S0 133 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 AKAP13Q12802 2813 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 GPRIN2O60269 458 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 SLC43A1O75387 559 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 RORCP51449 518 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 ALKBH1Q13686 389 aaKnown RBP16.82■□□□□ 0.28
SMC4-209ENST00000468653 MOGQ16653 247 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 CEACAM19Q7Z692 300 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 C20orf196Q8IYI0 205 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 DACH2Q96NX9 599 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 PDCD1LG2Q9BQ51 273 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 MED18Q9BUE0 208 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 MMP27Q9H306 513 aa16.82■□□□□ 0.28
SMC4-209ENST00000468653 CASKO14936 926 aa16.81■□□□□ 0.28
SMC4-209ENST00000468653 RIDAP52758 137 aaKnown RBP16.81■□□□□ 0.28
SMC4-209ENST00000468653 NANOS3P60323 173 aaKnown RBP16.81■□□□□ 0.28
SMC4-209ENST00000468653 ROR2Q01974 943 aaKnown RBP16.81■□□□□ 0.28
SMC4-209ENST00000468653 ACSM3Q53FZ2 586 aa16.81■□□□□ 0.28
SMC4-209ENST00000468653 PHYHD1Q5SRE7 291 aa16.81■□□□□ 0.28
SMC4-209ENST00000468653 CORO6Q6QEF8 472 aa16.81■□□□□ 0.28
SMC4-209ENST00000468653 SPACA3Q8IXA5 215 aa16.81■□□□□ 0.28
SMC4-209ENST00000468653 RPS4Y2Q8TD47 263 aa16.81■□□□□ 0.28
SMC4-209ENST00000468653 HSD17B8Q92506 261 aa16.81■□□□□ 0.28
SMC4-209ENST00000468653 RNF166Q96A37 237 aaPredicted RBP16.81■□□□□ 0.28
SMC4-209ENST00000468653 ULBP2Q9BZM5 246 aa16.81■□□□□ 0.28
SMC4-209ENST00000468653 C6orf62Q9GZU0 229 aaPredicted RBP16.81■□□□□ 0.28
SMC4-209ENST00000468653 EMC7Q9NPA0 242 aa16.81■□□□□ 0.28
SMC4-209ENST00000468653 FOXD3Q9UJU5 478 aaPredicted RBP16.81■□□□□ 0.28
SMC4-209ENST00000468653 A3GALT2U3KPV4 340 aa16.81■□□□□ 0.28
SMC4-209ENST00000468653 DHHO43323 396 aa16.8■□□□□ 0.28
SMC4-209ENST00000468653 CLEC2LP0C7M8 214 aa16.8■□□□□ 0.28
SMC4-209ENST00000468653 ZNF133P52736 654 aaPredicted RBP16.8■□□□□ 0.28
SMC4-209ENST00000468653 C3AR1Q16581 482 aa16.8■□□□□ 0.28
SMC4-209ENST00000468653 C10orf128Q5T292 105 aa16.8■□□□□ 0.28
SMC4-209ENST00000468653 IGFL3Q6UXB1 125 aa16.8■□□□□ 0.28
SMC4-209ENST00000468653 OR13C5Q8NGS8 318 aa16.8■□□□□ 0.28
SMC4-209ENST00000468653 OR2AJ1Q8NGZ0 328 aa16.8■□□□□ 0.28
SMC4-209ENST00000468653 ST7LQ8TDW4 575 aa16.8■□□□□ 0.28
SMC4-209ENST00000468653 RBM24Q9BX46 236 aaKnown RBP16.8■□□□□ 0.28
SMC4-209ENST00000468653 CYB5R1Q9UHQ9 305 aa16.8■□□□□ 0.28
SMC4-209ENST00000468653 UGT2A1Q9Y4X1 527 aa16.8■□□□□ 0.28
SMC4-209ENST00000468653 PCDHGA9Q9Y5G4 932 aaKnown RBP16.8■□□□□ 0.28
SMC4-209ENST00000468653 ZNF407Q9C0G0 2248 aa16.8■□□□□ 0.28
SMC4-209ENST00000468653 GPR171O14626 319 aa16.79■□□□□ 0.28
SMC4-209ENST00000468653 DVL2O14641 736 aa16.79■□□□□ 0.28
SMC4-209ENST00000468653 ZNF84P51523 738 aa16.79■□□□□ 0.28
SMC4-209ENST00000468653 ZNF169Q14929 603 aaPredicted RBP16.79■□□□□ 0.28
SMC4-209ENST00000468653 KCNMB1Q16558 191 aa16.79■□□□□ 0.28
SMC4-209ENST00000468653 SGCAQ16586 387 aa16.79■□□□□ 0.28
SMC4-209ENST00000468653 OR7E24Q6IFN5 339 aa16.79■□□□□ 0.28
SMC4-209ENST00000468653 LINC00299Q6ZSB3 139 aa16.79■□□□□ 0.28
SMC4-209ENST00000468653 OR6Q1Q8NGQ2 317 aa16.79■□□□□ 0.28
SMC4-209ENST00000468653 OR2G2Q8NGZ5 317 aa16.79■□□□□ 0.28
SMC4-209ENST00000468653 OR5AK2Q8NH90 309 aa16.79■□□□□ 0.28
SMC4-209ENST00000468653 RNF128Q8TEB7 428 aa16.79■□□□□ 0.28
SMC4-209ENST00000468653 SLC25A46Q96AG3 418 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms