RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 DPRXA6NFQ7 191 aa12.69□□□□□ -0.38
COL27A1-203ENST00000468565 J3QRK9 145 aa12.69□□□□□ -0.38
COL27A1-203ENST00000468565 SOX14O95416 240 aa12.69□□□□□ -0.38
COL27A1-203ENST00000468565 GSTM3P21266 225 aa12.69□□□□□ -0.38
COL27A1-203ENST00000468565 MPGP29372 298 aa12.69□□□□□ -0.38
COL27A1-203ENST00000468565 IFNGR2P38484 337 aa12.69□□□□□ -0.38
COL27A1-203ENST00000468565 FOXG1P55316 489 aaPredicted RBP12.69□□□□□ -0.38
COL27A1-203ENST00000468565 TGFBR3Q03167 851 aa12.69□□□□□ -0.38
COL27A1-203ENST00000468565 BSPH1Q075Z2 132 aa12.69□□□□□ -0.38
COL27A1-203ENST00000468565 MEDAGQ5VYS4 303 aa12.69□□□□□ -0.38
COL27A1-203ENST00000468565 KRTAP1-3Q8IUG1 177 aa12.69□□□□□ -0.38
COL27A1-203ENST00000468565 OR4K5Q8NGD3 323 aa12.69□□□□□ -0.38
COL27A1-203ENST00000468565 OR6T1Q8NGN1 323 aa12.69□□□□□ -0.38
COL27A1-203ENST00000468565 MCHR1Q99705 422 aa12.69□□□□□ -0.38
COL27A1-203ENST00000468565 TMEM43Q9BTV4 400 aa12.69□□□□□ -0.38
COL27A1-203ENST00000468565 NPAP1Q9NZP6 1156 aa12.69□□□□□ -0.38
COL27A1-203ENST00000468565 SLC25A15Q9Y619 301 aa12.69□□□□□ -0.38
COL27A1-203ENST00000468565 LOC102725191A0A1B0GVB3 256 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 PTHP01270 115 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 NKX6-1P78426 367 aaPredicted RBP12.68□□□□□ -0.38
COL27A1-203ENST00000468565 ARMCX4Q5H9R4 360 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 USP43Q70EL4 1123 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 KBTBD8Q8NFY9 601 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 OR8J1Q8NGP2 316 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 LILRB1Q8NHL6 650 aaPredicted RBP12.68□□□□□ -0.38
COL27A1-203ENST00000468565 RPL3LQ92901 407 aaKnown RBP12.68□□□□□ -0.38
COL27A1-203ENST00000468565 SLC41A3Q96GZ6 507 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 BOD1Q96IK1 185 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 OXGR1Q96P68 337 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 IL4I1Q96RQ9 567 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 DCSTAMPQ9H295 470 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 SLC25A19Q9HC21 320 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 AKIP1Q9NQ31 210 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 B3GAT1Q9P2W7 334 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 RCE1Q9Y256 329 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 CORINQ9Y5Q5 1042 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 FLNAP21333 2647 aaKnown RBP12.68□□□□□ -0.38
COL27A1-203ENST00000468565 ARHGEF9O43307 516 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 CHP2O43745 196 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 ENTPD6O75354 484 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 PAX1P15863 534 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 ZNF43P17038 809 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 GADD45AP24522 165 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 GRPRP30550 384 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 SLC15A1P46059 708 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 SELENOPP49908 381 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 TAS2R41P59536 307 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.68□□□□□ -0.38
COL27A1-203ENST00000468565 C1orf94Q6P1W5 598 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 LINC00114Q6XXX2 140 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 H1FNTQ75WM6 255 aaPredicted RBP12.68□□□□□ -0.38
COL27A1-203ENST00000468565 IGFN1Q86VF2 1251 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 SCAIQ8N9R8 606 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 WFDC11Q8NEX6 87 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 OR6Q1Q8NGQ2 317 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 OR52N5Q8NH56 324 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 ZNF417Q8TAU3 575 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 TMEM171Q8WVE6 324 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 FBXW5Q969U6 566 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 ZNF587Q96SQ5 575 aaPredicted RBP12.68□□□□□ -0.38
COL27A1-203ENST00000468565 LINC00470Q9BZP3 86 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 SLC17A5Q9NRA2 495 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 MAN2C1Q9NTJ4 1040 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 FAIMQ9NVQ4 179 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 AMDHD2Q9Y303 409 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 RPL36Q9Y3U8 105 aaKnown RBP12.68□□□□□ -0.38
COL27A1-203ENST00000468565 ACANP16112 2415 aa12.68□□□□□ -0.38
COL27A1-203ENST00000468565 USF3Q68DE3 2245 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 BGLAPP02818 100 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 HNRNPCP07910 306 aaKnown RBP eCLIP12.67□□□□□ -0.38
COL27A1-203ENST00000468565 TRAM2Q15035 370 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 OCLNQ16625 522 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 TIMM50Q3ZCQ8 353 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 ZNF672Q499Z4 452 aaPredicted RBP12.67□□□□□ -0.38
COL27A1-203ENST00000468565 ENTPD8Q5MY95 495 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 NIPAL3Q6P499 406 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 PRSS57Q6UWY2 283 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 GNPDA2Q8TDQ7 276 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 RADILQ96JH8 1075 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 COX4I2Q96KJ9 171 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 GSX2Q9BZM3 304 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 RACGAP1Q9H0H5 632 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 ANKRD19PQ9H560 264 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 TMEM165Q9HC07 324 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 DLL4Q9NR61 685 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 SEC14L4Q9UDX3 406 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 ERGIC3Q9Y282 383 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 ALPK2Q86TB3 2170 aa12.67□□□□□ -0.38
COL27A1-203ENST00000468565 ZNF587BE7ETH6 402 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 KRT33AO76009 404 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 IGFBP1P08833 259 aaPredicted RBP12.66□□□□□ -0.38
COL27A1-203ENST00000468565 FOSL1P15407 271 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 PTAFRP25105 342 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 RGS6P49758 472 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 LTBQ06643 244 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 RGS21Q2M5E4 152 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 C9orf135Q5VTT2 229 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 TMEM108Q6UXF1 575 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 ZER1Q7Z7L7 766 aa12.66□□□□□ -0.38
COL27A1-203ENST00000468565 KDM8Q8N371 416 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms