RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 HIST1H2AAQ96QV6 131 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 IL4I1Q96RQ9 567 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 TIMP4Q99727 224 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 APOL4Q9BPW4 351 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 PSD2Q9BQI7 771 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF426Q9BUY5 554 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 EMC6Q9BV81 110 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 KATNB1Q9BVA0 655 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 DPCDQ9BVM2 203 aaPredicted RBP3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 TEX12Q9BXU0 123 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 POLDIP3Q9BY77 421 aaKnown RBP3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 SRXN1Q9BYN0 137 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 KRTAP17-1Q9BYP8 105 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 WDR12Q9GZL7 423 aaKnown RBP3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 NDEL1Q9GZM8 345 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 SLC25A18Q9H1K4 315 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ZDHHC11Q9H8X9 412 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 FKRPQ9H9S5 495 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 CALHM2Q9HA72 323 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ACKR4Q9NPB9 350 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 CHST11Q9NPF2 352 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 TIGARQ9NQ88 270 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 INIPQ9NRY2 104 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ASF1BQ9NVP2 202 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 IMPAD1Q9NX62 359 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 QPCTLQ9NXS2 382 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF226Q9NYT6 803 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 TAS2R5Q9NYW4 299 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 IL20Q9NYY1 176 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 UBAP1Q9NZ09 502 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 SPRR3Q9UBC9 169 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 GRHPRQ9UBQ7 328 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ENOPH1Q9UHY7 261 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 SH3BGRL2Q9UJC5 107 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 PRDM4Q9UKN5 801 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 RAB26Q9ULW5 256 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 CLEC4AQ9UMR7 237 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 RNF6Q9Y252 685 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 SIGLEC7Q9Y286 467 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 LRCH1Q9Y2L9 728 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 GPR52Q9Y2T5 361 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 HDGFL3Q9Y3E1 203 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 ADAM18Q9Y3Q7 739 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 LRRC42Q9Y546 428 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 PCDHGB5Q9Y5G0 923 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 CDH10Q9Y6N8 788 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 CPAMD8Q8IZJ3 1885 aa3.62□□□□□ -1.83
TMEM39A-204ENST00000468545 APC2O95996 2303 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 CFAP54Q96N23 3096 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 PIEZO1Q92508 2521 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 TEX13CA0A0J9YWL9 993 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 HTR3EA5X5Y0 456 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 FAM183AA6NL82 134 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 KDM4EB2RXH2 506 aaPredicted RBP3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 FTCDNL1E5RQL4 147 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 PTGES3LE9PB15 166 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 PRR23D1E9PI22 279 aaPredicted RBP3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 H0YAE9 185 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 H7C1C5 153 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 XKRYO14609 159 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 IMPA2O14732 288 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 DENRO43583 198 aaKnown RBP3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 PRKYO43930 277 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 EIF1BO60739 113 aaKnown RBP3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 PMS2P2O95744 297 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 BCL10O95999 233 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 RENP00797 406 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 IFNGP01579 166 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 TPOP07202 933 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 CD14P08571 375 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 PRR23D2P0DMB1 279 aaPredicted RBP3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 SFTPCP11686 197 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 HIST1H1CP16403 213 aaKnown RBP3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 ABOP16442 354 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF708P17019 499 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 ZNF43P17038 809 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 GRK5P34947 590 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 CDKN2AP42771 156 aaKnown RBP3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 PCYT1AP49585 367 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 NUDT6P53370 316 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 BIDP55957 195 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 CLDN17P56750 224 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 CLDN18P56856 261 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 FXYD6P3P58550 94 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 PRPS1P60891 318 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 LCN6P62502 163 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 CDK5Q00535 292 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 POU3F1Q03052 451 aaPredicted RBP3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 PUDPQ08623 228 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 CD47Q08722 323 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 RASGEF1BQ0VAM2 473 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 ZP4Q12836 540 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 CAMK2DQ13557 499 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 FHL1Q13642 323 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 KEAP1Q14145 624 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 PON3Q15166 354 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 BCL2A1Q16548 175 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 ACKR1Q16570 336 aa3.61□□□□□ -1.83
TMEM39A-204ENST00000468545 CTU2Q2VPK5 515 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms