RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 SPRR3Q9UBC9 169 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 TRDV1A0A1B0GX56 115 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 GABRPO00591 440 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 DVL2O14641 736 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 OGG1O15527 345 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 HRGP04196 525 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 TACSTD2P09758 323 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 EDNRAP25101 427 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 IGFL3Q6UXB1 125 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 LRRN1Q6UXK5 716 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 SPATC1Q76KD6 591 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 HSD17B8Q92506 261 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 GHSRQ92847 366 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 TMEM54Q969K7 222 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 SMIM19Q96E16 107 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 ABHD6Q9BV23 337 aa18.25■□□□□ 0.51
TMEM53-207ENST00000468117 FREM1Q5H8C1 2179 aa18.24■□□□□ 0.51
TMEM53-207ENST00000468117 SVILO95425 2214 aa18.24■□□□□ 0.51
TMEM53-207ENST00000468117 TRBV2A0A0J9YWF9 115 aa18.24■□□□□ 0.51
TMEM53-207ENST00000468117 UPK3AO75631 287 aa18.24■□□□□ 0.51
TMEM53-207ENST00000468117 SULT1C4O75897 302 aa18.24■□□□□ 0.51
TMEM53-207ENST00000468117 CLPXO76031 633 aa18.24■□□□□ 0.51
TMEM53-207ENST00000468117 WNT11O96014 354 aa18.24■□□□□ 0.51
TMEM53-207ENST00000468117 PDGFAP04085 211 aa18.24■□□□□ 0.51
TMEM53-207ENST00000468117 FGF9P31371 208 aaPredicted RBP18.24■□□□□ 0.51
TMEM53-207ENST00000468117 PCK2Q16822 640 aa18.24■□□□□ 0.51
TMEM53-207ENST00000468117 RPL22L1Q6P5R6 122 aaKnown RBP18.24■□□□□ 0.51
TMEM53-207ENST00000468117 TMEM91Q6ZNR0 172 aa18.24■□□□□ 0.51
TMEM53-207ENST00000468117 TTYH2Q9BSA4 534 aa18.24■□□□□ 0.51
TMEM53-207ENST00000468117 SLIRPQ9GZT3 109 aaKnown RBP18.24■□□□□ 0.51
TMEM53-207ENST00000468117 PCDHGA9Q9Y5G4 932 aaKnown RBP18.24■□□□□ 0.51
TMEM53-207ENST00000468117 PTPRQQ9UMZ3 2332 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 GDI2P50395 445 aaKnown RBP18.23■□□□□ 0.51
TMEM53-207ENST00000468117 NANOS3P60323 173 aaKnown RBP18.23■□□□□ 0.51
TMEM53-207ENST00000468117 CCDC58Q4VC31 144 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 CORO6Q6QEF8 472 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 DCXRQ7Z4W1 244 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 OR10H5Q8NGA6 315 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 FNDC9Q8TBE3 224 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 TBC1D15Q8TC07 691 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 ASB17Q8WXJ9 295 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 KCTD7Q96MP8 289 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 OR8B4Q96RC9 309 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 EMC7Q9NPA0 242 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 FOXD3Q9UJU5 478 aaPredicted RBP18.23■□□□□ 0.51
TMEM53-207ENST00000468117 PIEZO2Q9H5I5 2752 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 K7EM74 188 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 NR2C1P13056 603 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 RPS19P39019 145 aaKnown RBP18.23■□□□□ 0.51
TMEM53-207ENST00000468117 ZNF169Q14929 603 aaPredicted RBP18.23■□□□□ 0.51
TMEM53-207ENST00000468117 TEX30Q5JUR7 227 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 ZNF454Q8N9F8 522 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 PDCD1LG2Q9BQ51 273 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 CDADC1Q9BWV3 514 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 ELOVL3Q9HB03 270 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 GALNT8Q9NY28 637 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 GSTK1Q9Y2Q3 226 aa18.23■□□□□ 0.51
TMEM53-207ENST00000468117 RGS9O75916 674 aaPredicted RBP18.22■□□□□ 0.51
TMEM53-207ENST00000468117 WISP2O76076 250 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 AQP8O94778 261 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 SYNGR4O95473 234 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 CD53P19397 219 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 MXD1Q05195 221 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 KCTD18Q6PI47 426 aaPredicted RBP18.22■□□□□ 0.51
TMEM53-207ENST00000468117 AAED1Q7RTV5 226 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 ZNF679Q8IYX0 411 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 OR13C5Q8NGS8 318 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 OR52N5Q8NH56 324 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 ST7LQ8TDW4 575 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 RNF128Q8TEB7 428 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 PNPLA2Q96AD5 504 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 WDYHV1Q96HA8 205 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 COQ7Q99807 217 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 MROQ9BYG7 248 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 PAQR5Q9NXK6 330 aaPredicted RBP18.22■□□□□ 0.51
TMEM53-207ENST00000468117 MCTS1Q9ULC4 181 aaKnown RBP18.22■□□□□ 0.51
TMEM53-207ENST00000468117 RCE1Q9Y256 329 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 UGT2A1Q9Y4X1 527 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 CDRT1O95170 752 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 TGM4P49221 684 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 KRT77Q7Z794 578 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 C20orf196Q8IYI0 205 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 ABHD4Q8TB40 342 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 TPK1Q9H3S4 243 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 CYB5R1Q9UHQ9 305 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 CAMK2AQ9UQM7 478 aa18.22■□□□□ 0.51
TMEM53-207ENST00000468117 A0A087WV48 116 aa18.21■□□□□ 0.51
TMEM53-207ENST00000468117 A0A1B0GTH9 108 aa18.21■□□□□ 0.51
TMEM53-207ENST00000468117 SLC34A2O95436 690 aa18.21■□□□□ 0.51
TMEM53-207ENST00000468117 SDC2P34741 201 aa18.21■□□□□ 0.51
TMEM53-207ENST00000468117 ROM1Q03395 351 aa18.21■□□□□ 0.51
TMEM53-207ENST00000468117 C10orf128Q5T292 105 aa18.21■□□□□ 0.51
TMEM53-207ENST00000468117 CHMP1BQ7LBR1 199 aa18.21■□□□□ 0.51
TMEM53-207ENST00000468117 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.21■□□□□ 0.51
TMEM53-207ENST00000468117 RBM24Q9BX46 236 aaKnown RBP18.21■□□□□ 0.51
TMEM53-207ENST00000468117 PRRG4Q9BZD6 226 aa18.21■□□□□ 0.51
TMEM53-207ENST00000468117 ULBP2Q9BZM5 246 aa18.21■□□□□ 0.51
TMEM53-207ENST00000468117 SNTG1Q9NSN8 517 aa18.21■□□□□ 0.51
TMEM53-207ENST00000468117 BSNQ9UPA5 3926 aa18.2■□□□□ 0.5
TMEM53-207ENST00000468117 MAP1BP46821 2468 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms