RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 SLC22A31A6NKX4 558 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 SNTNA6NMZ2 147 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 C12orf71A8MTZ7 269 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 PRSS44E7EML9 344 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 UBL3O95164 117 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 CLIC3O95833 236 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 WNT11O96014 354 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 SLC2A5P22732 501 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 LSM6P62312 80 aaKnown RBP13.31□□□□□ -0.28
SNIP1-202ENST00000468040 APOFQ13790 326 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 OCLNQ16625 522 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 SLC16A14Q7RTX9 510 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 C8orf59Q8N0T1 100 aaPredicted RBP13.31□□□□□ -0.28
SNIP1-202ENST00000468040 OR10H5Q8NGA6 315 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 RHOXF1Q8NHV9 184 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 C11orf40Q8WZ69 217 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 UBE2FQ969M7 185 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 FOXN4Q96NZ1 517 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 ZNF184Q99676 751 aaPredicted RBP13.31□□□□□ -0.28
SNIP1-202ENST00000468040 WACQ9BTA9 647 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 MED18Q9BUE0 208 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 SLC24A3Q9HC58 644 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 RASSF1Q9NS23 344 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 KCNG2Q9UJ96 466 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 RAB26Q9ULW5 256 aa13.31□□□□□ -0.28
SNIP1-202ENST00000468040 SH3D21A4FU49 640 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 MPZL1O95297 269 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 CST2P09228 141 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 GNAO1P09471 354 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 ZNF823P16415 610 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 IGFBP2P18065 325 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 GABRB1P18505 474 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 GSTT1P30711 240 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 HTR1FP30939 366 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 CAPZA2P47755 286 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 CDH11P55287 796 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 PCBD1P61457 104 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 TEKQ02763 1124 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 DBPQ10586 325 aaPredicted RBP13.3□□□□□ -0.28
SNIP1-202ENST00000468040 TMED1Q13445 227 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 MAD2L1BPQ15013 274 aaPredicted RBP13.3□□□□□ -0.28
SNIP1-202ENST00000468040 PPA1Q15181 289 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 TAB1Q15750 504 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 LINC01590Q5TEZ4 76 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 USP51Q70EK9 711 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 MEPCEQ7L2J0 689 aaKnown RBP13.3□□□□□ -0.28
SNIP1-202ENST00000468040 SYT9Q86SS6 491 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 SKA3Q8IX90 412 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 LRRC18Q8N456 261 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 WDR31Q8NA23 367 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 OR52N5Q8NH56 324 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 ZNRF4Q8WWF5 429 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 HTRA1Q92743 480 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 ZNF582Q96NG8 517 aaPredicted RBP13.3□□□□□ -0.28
SNIP1-202ENST00000468040 DACH2Q96NX9 599 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 TEAD3Q99594 435 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 SH3GL3Q99963 347 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 CCNB1IP1Q9NPC3 277 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 CLN6Q9NWW5 311 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 DNAJC27Q9NZQ0 273 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 WARS2Q9UGM6 360 aaKnown RBP13.3□□□□□ -0.28
SNIP1-202ENST00000468040 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.3□□□□□ -0.28
SNIP1-202ENST00000468040 POLR1DQ9Y2S0 133 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 SLC25A15Q9Y619 301 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 COMMD3-BMI1R4GMX3 469 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 DOPEY1Q5JWR5 2465 aa13.3□□□□□ -0.28
SNIP1-202ENST00000468040 C19orf84I3L1E1 186 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 GPANK1O95872 356 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 HLA-HP01893 362 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 TFP02787 698 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 CD79AP11912 226 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 ARR3P36575 388 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 KIR2DL3P43628 341 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 ISL1P61371 349 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 ADAM8P78325 824 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 AQP6Q13520 282 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 ENDOGQ14249 297 aaKnown RBP13.29□□□□□ -0.28
SNIP1-202ENST00000468040 GGTLC2Q14390 218 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 GSG1Q2KHT4 349 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 BCDIN3DQ7Z5W3 292 aaKnown RBP13.29□□□□□ -0.28
SNIP1-202ENST00000468040 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.29□□□□□ -0.28
SNIP1-202ENST00000468040 DMRTC2Q8IXT2 367 aaPredicted RBP13.29□□□□□ -0.28
SNIP1-202ENST00000468040 ZNF511Q8NB15 262 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 ZMYND19Q96E35 227 aaPredicted RBP13.29□□□□□ -0.28
SNIP1-202ENST00000468040 WFIKKN1Q96NZ8 548 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 INTS14Q96SY0 518 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 ZNF416Q9BWM5 594 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 CDADC1Q9BWV3 514 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 ANKRD60Q9BZ19 345 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 Q9H521 79 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 MARCH7Q9H992 704 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 EMC7Q9NPA0 242 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 NGBQ9NPG2 151 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 MRPL22Q9NWU5 206 aaKnown RBP13.29□□□□□ -0.28
SNIP1-202ENST00000468040 HAO2Q9NYQ3 351 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 FBXL3Q9UKT7 428 aa13.29□□□□□ -0.28
SNIP1-202ENST00000468040 A0A1W2PR80 420 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 A1L4Q6 167 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 CCDC182A6NF36 153 aa13.28□□□□□ -0.28
SNIP1-202ENST00000468040 TVP23AA6NH52 213 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms