RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 ACVR1BP36896 505 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 DAP3P51398 398 aaKnown RBP6.09□□□□□ -1.43
SCAF4-204ENST00000467731 SLC16A1P53985 500 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 BIDP55957 195 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 CLDN17P56750 224 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 CDC42P60953 191 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 RPL27P61353 136 aaKnown RBP6.09□□□□□ -1.43
SCAF4-204ENST00000467731 LCN6P62502 163 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 RNPS1Q15287 305 aaKnown RBP6.09□□□□□ -1.43
SCAF4-204ENST00000467731 TOR2AQ5JU69 321 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 ZNF691Q5VV52 312 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 NSUN5P2Q63ZY6 315 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 C12orf73Q69YU5 71 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 PLEKHG7Q6ZR37 379 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 PTCHD4Q6ZW05 846 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 DOLPP1Q86YN1 238 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 TUSC5Q8IXB3 177 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 ENTHD1Q8IYW4 607 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 GCNT2Q8N0V5 402 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 ZIC4Q8N9L1 334 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 C9orf106Q8NAJ2 232 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 ZNF540Q8NDQ6 660 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 SDR9C7Q8NEX9 313 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 OR52E2Q8NGJ4 325 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 OR4K13Q8NH42 304 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 ZNF519Q8TB69 540 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 ASB10Q8WXI3 467 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 FBXW5Q969U6 566 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 TEX12Q9BXU0 123 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 ANKRD60Q9BZ19 345 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 TINAGL1Q9GZM7 467 aaPredicted RBP6.09□□□□□ -1.43
SCAF4-204ENST00000467731 IFT46Q9NQC8 304 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 CMC2Q9NRP2 79 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 RASSF1Q9NS23 344 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 IMPAD1Q9NX62 359 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 AASSQ9UDR5 926 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 BAIAP2Q9UQB8 552 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 CACNA1CQ13936 2221 aa6.09□□□□□ -1.43
SCAF4-204ENST00000467731 IGKV3D-15A0A087WSY6 115 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 CD8B2A6NJW9 211 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 CENPXA8MT69 81 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 CLDN25C9JDP6 229 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 ARHGEF9O43307 516 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 PRKYO43930 277 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 GMDSO60547 372 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 SCO1O75880 301 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 ATE1O95260 518 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 TXNDC12O95881 172 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 PTGER4P35408 488 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 CDKN2AP42771 156 aaKnown RBP6.09□□□□□ -1.44
SCAF4-204ENST00000467731 BAMBIQ13145 260 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 KRR1Q13601 381 aaKnown RBP6.09□□□□□ -1.44
SCAF4-204ENST00000467731 GPR139Q6DWJ6 353 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 SEM1Q6ZVN7 128 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 HDDC2Q7Z4H3 204 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 MCEMP1Q8IX19 187 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 ARIH2OSQ8N7S6 290 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 TCEANCQ8N8B7 351 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 CYB561A3Q8NBI2 242 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 WNT2BQ93097 391 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 MYDGFQ969H8 173 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 CNBD2Q96M20 576 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 SLC38A2Q96QD8 506 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 IL4I1Q96RQ9 567 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 NMNAT3Q96T66 252 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 PRRG3Q9BZD7 231 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 CALHM2Q9HA72 323 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 BCO1Q9HAY6 547 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 EIF3KQ9UBQ5 218 aaKnown RBP6.09□□□□□ -1.44
SCAF4-204ENST00000467731 RNF6Q9Y252 685 aa6.09□□□□□ -1.44
SCAF4-204ENST00000467731 FAM183AA6NL82 134 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 XKRYO14609 159 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 TLX2O43763 284 aaPredicted RBP6.08□□□□□ -1.44
SCAF4-204ENST00000467731 GRK5P34947 590 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 ATP6V1E1P36543 226 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 SELENOPP49908 381 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 ISL1P61371 349 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 IL5RAQ01344 420 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.08□□□□□ -1.44
SCAF4-204ENST00000467731 MRPL49Q13405 166 aaKnown RBP6.08□□□□□ -1.44
SCAF4-204ENST00000467731 CAMK2DQ13557 499 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 COTL1Q14019 142 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 CRMP1Q14194 572 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 C1orf185Q5T7R7 199 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 HES5Q5TA89 166 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 LEG1Q6P5S2 330 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.08□□□□□ -1.44
SCAF4-204ENST00000467731 BCDIN3DQ7Z5W3 292 aaKnown RBP6.08□□□□□ -1.44
SCAF4-204ENST00000467731 C8orf59Q8N0T1 100 aaPredicted RBP6.08□□□□□ -1.44
SCAF4-204ENST00000467731 SYT14Q8NB59 555 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 YIPF5Q969M3 257 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 GMPPAQ96IJ6 420 aaPredicted RBP6.08□□□□□ -1.44
SCAF4-204ENST00000467731 APOL4Q9BPW4 351 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 WDR12Q9GZL7 423 aaKnown RBP6.08□□□□□ -1.44
SCAF4-204ENST00000467731 EXTL2Q9UBQ6 330 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 ZNF221Q9UK13 617 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 PCDHGB5Q9Y5G0 923 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 NCOA6Q14686 2063 aaPredicted RBP6.08□□□□□ -1.44
SCAF4-204ENST00000467731 MYO18BQ8IUG5 2567 aa6.08□□□□□ -1.44
SCAF4-204ENST00000467731 FLNCQ14315 2725 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms