RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 SIAEQ9HAT2 523 aa12.15□□□□□ -0.46
CCHCR1-211ENST00000467553 IER3IP1Q9Y5U9 82 aa12.15□□□□□ -0.46
CCHCR1-211ENST00000467553 VWC2LB2RUY7 222 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 TNFRSF11BO00300 401 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 KRT36O76013 467 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 SERPINA5P05154 406 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 ERCC1P07992 297 aaPredicted RBP12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 OR4A8P0C604 315 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 NPR2P20594 1047 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 THBS4P35443 961 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 IFNGR2P38484 337 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 PPOXP50336 477 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 PPP1R8Q12972 351 aaKnown RBP12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 DAG1Q14118 895 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 DNAL1Q4LDG9 190 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 FAM98BQ52LJ0 330 aaKnown RBP12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 KRT80Q6KB66 452 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 SMARCD3Q6STE5 483 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 THSD4Q6ZMP0 1018 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 GNPDA2Q8TDQ7 276 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 RASD2Q96D21 266 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 NMD3Q96D46 503 aaKnown RBP12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 ASB9Q96DX5 294 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 BTBD10Q9BSF8 475 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 REPIN1Q9BWE0 567 aaKnown RBP12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 SHARPINQ9H0F6 387 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 RERGLQ9H628 205 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 SMURF2Q9HAU4 748 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 CCNB1IP1Q9NPC3 277 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 FBXL3Q9UKT7 428 aa12.14□□□□□ -0.47
CCHCR1-211ENST00000467553 TEX13CA0A0J9YWL9 993 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 A0A1W2PPL8 197 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 SLC22A23A1A5C7 686 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 SOCS2O14508 198 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 ACOT8O14734 319 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 LMX1BO60663 402 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 IGHV4-31P0DP07 118 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 CCL2P13500 99 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 ZNF35P13682 527 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 NR4A2P43354 598 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 RPS6KA3P51812 740 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 FXYD6P3P58550 94 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 MRPS34P82930 218 aaKnown RBP12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 GALK2Q01415 458 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 PLP2Q04941 152 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 TRAP1Q12931 704 aaKnown RBP12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 SNTB2Q13425 540 aaKnown RBP12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 NRN1LQ496H8 165 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 MESTQ5EB52 335 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 UGT2A3Q6UWM9 527 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 DPY19L2P2Q6ZN68 376 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 FAM122BQ7Z309 247 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 DPPA2Q7Z7J5 298 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 SLC7A6OSQ96CW6 309 aaPredicted RBP12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 RAB1BQ9H0U4 201 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 PLK3Q9H4B4 646 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 MAGIXQ9H6Y5 334 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 ZNF442Q9H7R0 627 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 NRIP3Q9NQ35 241 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 SPEF1Q9Y4P9 236 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 UGT2A1Q9Y4X1 527 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 LYVE1Q9Y5Y7 322 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 ANK2Q01484 3957 aa12.13□□□□□ -0.47
CCHCR1-211ENST00000467553 IQCMA0A1B0GVH7 501 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 PRSS37A4D1T9 235 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 MGRN1O60291 552 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 PPP1R3DO95685 299 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 PTHP01270 115 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 NR4A1P22736 598 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 LAP3P28838 519 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 SDHAP31040 664 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 HMGA2P52926 109 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 HSF2Q03933 536 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 KRR1Q13601 381 aaKnown RBP12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 ADIPOQQ15848 244 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 RFX4Q33E94 735 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 GPR139Q6DWJ6 353 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 FAM166AQ6J272 317 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 C1orf94Q6P1W5 598 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 ZNF584Q8IVC4 421 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 SLC30A7Q8NEW0 376 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 FANK1Q8TC84 345 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 NEU4Q8WWR8 484 aaPredicted RBP12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 POP5Q969H6 163 aaKnown RBP12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 NABP1Q96AH0 204 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 SAMD8Q96LT4 415 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 FOXN4Q96NZ1 517 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 ERMAPQ96PL5 475 aaPredicted RBP12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 VRK1Q99986 396 aaPredicted RBP12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 TRIM15Q9C019 465 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 OR52D1Q9H346 318 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 CDH20Q9HBT6 801 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 KCNS2Q9ULS6 477 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 CMAHPQ9Y471 501 aa12.12□□□□□ -0.47
CCHCR1-211ENST00000467553 IMPA2O14732 288 aa12.11□□□□□ -0.47
CCHCR1-211ENST00000467553 AHCYL1O43865 530 aa12.11□□□□□ -0.47
CCHCR1-211ENST00000467553 DNAJC8O75937 253 aaPredicted RBP12.11□□□□□ -0.47
CCHCR1-211ENST00000467553 CCNB2O95067 398 aa12.11□□□□□ -0.47
CCHCR1-211ENST00000467553 GASTP01350 101 aa12.11□□□□□ -0.47
CCHCR1-211ENST00000467553 MMP7P09237 267 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms