RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 ALPK2Q86TB3 2170 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 CNOT4O95628 575 aaKnown RBP13.05□□□□□ -0.32
DDX56-208ENST00000467318 GRK5P34947 590 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 OR3A2P47893 321 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 SELENOPP49908 381 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 SIRPAP78324 504 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 CAMK2DQ13557 499 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 TSTQ16762 297 aaKnown RBP13.05□□□□□ -0.32
DDX56-208ENST00000467318 PGGHGQ32M88 737 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 VWA1Q6PCB0 445 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 TMEM123Q8N131 208 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 ZBTB8BQ8NAP8 495 aaPredicted RBP13.05□□□□□ -0.32
DDX56-208ENST00000467318 POMGNT2Q8NAT1 580 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 OR4Q3Q8NH05 313 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 ASB5Q8WWX0 329 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 NEURL2Q9BR09 285 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 CHCHD6Q9BRQ6 235 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 MRPL13Q9BYD1 178 aaKnown RBP13.05□□□□□ -0.32
DDX56-208ENST00000467318 C6orf62Q9GZU0 229 aaPredicted RBP13.05□□□□□ -0.32
DDX56-208ENST00000467318 OR51E2Q9H255 320 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 C12orf49Q9H741 205 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 PROCRQ9UNN8 238 aa13.05□□□□□ -0.32
DDX56-208ENST00000467318 INTS1Q8N201 2190 aaKnown RBP13.04□□□□□ -0.32
DDX56-208ENST00000467318 TEX13CA0A0J9YWL9 993 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 ARHGEF9O43307 516 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 CGAP01215 116 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 IFNGP01579 166 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 PGA4P0DJD7 388 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 PGA3P0DJD8 388 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 BMP5P22003 454 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 PSMA1P25786 263 aaKnown RBP13.04□□□□□ -0.32
DDX56-208ENST00000467318 CHRNB4P30926 498 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 DEFA1P59665 94 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 DEFA3P59666 94 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 ADORA2A-AS1P86434 159 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 ACSM5Q6NUN0 579 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 BTLAQ7Z6A9 289 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 SLC38A2Q96QD8 506 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 SNX18Q96RF0 628 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 IL4I1Q96RQ9 567 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 KCNK17Q96T54 332 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 ALG12Q9BV10 488 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 CDADC1Q9BWV3 514 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 LINC00470Q9BZP3 86 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 SLCO5A1Q9H2Y9 848 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 ISYNA1Q9NPH2 558 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 CMC2Q9NRP2 79 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 KLHL21Q9UJP4 597 aa13.04□□□□□ -0.32
DDX56-208ENST00000467318 PRSS37A4D1T9 235 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 MSTNO14793 375 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 HIST1H1CP16403 213 aaKnown RBP13.03□□□□□ -0.32
DDX56-208ENST00000467318 AGAP20933 346 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 PCYT1AP49585 367 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 CLRN1P58418 232 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 SPHARQ15513 63 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 MESTQ5EB52 335 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 SPANXN2Q5MJ10 180 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 SLC35F1Q5T1Q4 408 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 FBXW9Q5XUX1 488 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 TFAP2EQ6VUC0 442 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 ABHD12BQ7Z5M8 362 aaPredicted RBP13.03□□□□□ -0.32
DDX56-208ENST00000467318 JAZF1Q86VZ6 243 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 C20orf196Q8IYI0 205 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 IQCF1Q8N6M8 205 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 NANOGP1Q8N7R0 232 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 TCEANCQ8N8B7 351 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 OR6N1Q8NGY5 312 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 RASD2Q96D21 266 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 RBP7Q96R05 134 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 NUAK2Q9H093 628 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 UPB1Q9UBR1 384 aa13.03□□□□□ -0.32
DDX56-208ENST00000467318 FOXD3Q9UJU5 478 aaPredicted RBP13.03□□□□□ -0.32
DDX56-208ENST00000467318 DIMT1Q9UNQ2 313 aaKnown RBP13.03□□□□□ -0.32
DDX56-208ENST00000467318 RIIAD1A6NNX1 92 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 KRT33AO76009 404 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 RAB36O95755 333 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 PTTG1O95997 202 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 ZNF3P17036 446 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 CSNK1A1P48729 337 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 IFITM3Q01628 133 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 RUNX1T1Q06455 604 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 MLLT11Q13015 90 aaPredicted RBP13.02□□□□□ -0.32
DDX56-208ENST00000467318 HIST3H3Q16695 136 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 ZNF362Q5T0B9 420 aaPredicted RBP13.02□□□□□ -0.32
DDX56-208ENST00000467318 THEM4Q5T1C6 240 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 TSPO2Q5TGU0 170 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 XKRXQ6PP77 449 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 BEND4Q6ZU67 534 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 MRGPRGQ86SM5 289 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 GPR137CQ8N3F9 429 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 NOXO1Q8NFA2 376 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 OR52E2Q8NGJ4 325 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 OR4K13Q8NH42 304 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 OR5M11Q96RB7 305 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 B3GAT2Q9NPZ5 323 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 MRPS18AQ9NVS2 196 aaKnown RBP13.02□□□□□ -0.32
DDX56-208ENST00000467318 TVP23BQ9NYZ1 205 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 GLTPQ9NZD2 209 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 MALT1Q9UDY8 824 aa13.02□□□□□ -0.32
DDX56-208ENST00000467318 STUB1Q9UNE7 303 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms