RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, human

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSSC4-208	ENST00000467308	KPNA4	O00629	521 aa	Predicted RBP	13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	DENR	O43583	198 aa	Known RBP	13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	AHSA1	O95433	338 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	BGLAP	P02818	100 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	ERCC1	P07992	297 aa	Predicted RBP	13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	ASAH2B	P0C7U1	165 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	SRP14	P37108	136 aa	Known RBP	13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	CAPG	P40121	348 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	GPR4	P46093	362 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	CRISP1	P54107	249 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	IL18R1	Q13478	541 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	FHL1	Q13642	323 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	TBRG1	Q3YBR2	411 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	ANKRD16	Q6P6B7	361 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	UGT2A3	Q6UWM9	527 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	ZNF620	Q6ZNG0	422 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	USP51	Q70EK9	711 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	FAM169B	Q8N8A8	192 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	LINC01356	Q8N9X3	169 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	OR4F15	Q8NGB8	312 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	OR1K1	Q8NGR3	316 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	NEU4	Q8WWR8	484 aa	Predicted RBP	13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	TAAR8	Q969N4	342 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	HRASLS5	Q96KN8	279 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	ZNF385A	Q96PM9	386 aa	Known RBP	13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	PITX2	Q99697	317 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	NDRG4	Q9ULP0	352 aa	Known RBP	13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	CORIN	Q9Y5Q5	1042 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	CDH10	Q9Y6N8	788 aa		13.61	□□□□□ -0.23
TSSC4-208	ENST00000467308	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	ZC3H12D	A2A288	527 aa	Known RBP	13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	OR6C65	A6NJZ3	312 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	AQP7P3	A6NL99	342 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	ZAR1L	A6NP61	321 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	ZNF587B	E7ETH6	402 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	LILRA1	O75019	489 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	KRT33A	O76009	404 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	CH25H	O95992	272 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	IGLV1-44	P01699	117 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	SAG	P10523	405 aa	Predicted RBP	13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	DAO	P14920	347 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	ACADS	P16219	412 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	FUT1	P19526	365 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	APEX1	P27695	318 aa	Known RBP	13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	UBE2N	P61088	152 aa	Known RBP	13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	NAAA	Q02083	359 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	ZBED5	Q49AG3	693 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	C12orf54	Q6X4T0	127 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	OAF	Q86UD1	273 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	SCAI	Q8N9R8	606 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	ZNF555	Q8NEP9	628 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	NUP37	Q8NFH4	326 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	ZFAND2B	Q8WV99	257 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	ANKRD60	Q9BZ19	345 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	ZNF442	Q9H7R0	627 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	SLC25A19	Q9HC21	320 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308	NANS	Q9NR45	359 aa		13.6	□□□□□ -0.23
TSSC4-208	ENST00000467308		A0A0A6YYJ9	748 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	LOC100130705	A0A1B0GUX0	176 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	LIPT2	A6NK58	231 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	VSTM5	A8MXK1	200 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	AKR7A3	O95154	331 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	CECR9	P0C854	216 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	PCMT1	P22061	227 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	CFP	P27918	469 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	IL2RG	P31785	369 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	RPS5	P46782	204 aa	Known RBP	13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	CDH15	P55291	814 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	CDK5	Q00535	292 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	TAF11	Q15544	211 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	ZIK1	Q3SY52	487 aa	Predicted RBP	13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	VHLL	Q6RSH7	139 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	SMARCD3	Q6STE5	483 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	ZNF786	Q8N393	782 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	TMEM99	Q8N816	258 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	ADPRHL1	Q8NDY3	354 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	BCL2L2	Q92843	193 aa	Predicted RBP	13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	MOGAT1	Q96PD6	335 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	GPX7	Q96SL4	187 aa	Predicted RBP	13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	PLA2G12A	Q9BZM1	189 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	RIBC2	Q9H4K1	309 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	MRPL39	Q9NYK5	338 aa	Known RBP	13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	HIF3A	Q9Y2N7	669 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	HSPE1-MOB4	S4R3N1	261 aa		13.59	□□□□□ -0.23
TSSC4-208	ENST00000467308	WIPF1	O43516	503 aa		13.58	□□□□□ -0.24
TSSC4-208	ENST00000467308	VAMP5	O95183	116 aa		13.58	□□□□□ -0.24
TSSC4-208	ENST00000467308	IGKV3-15	P01624	115 aa		13.58	□□□□□ -0.24
TSSC4-208	ENST00000467308	HOXB1	P14653	301 aa	Predicted RBP	13.58	□□□□□ -0.24
TSSC4-208	ENST00000467308	EPHA2	P29317	976 aa		13.58	□□□□□ -0.24
TSSC4-208	ENST00000467308	POLR2I	P36954	125 aa	Known RBP	13.58	□□□□□ -0.24
TSSC4-208	ENST00000467308	GIPR	P48546	466 aa		13.58	□□□□□ -0.24
TSSC4-208	ENST00000467308	DVL1P1	P54792	670 aa	Predicted RBP	13.58	□□□□□ -0.24
TSSC4-208	ENST00000467308	FXYD6P3	P58550	94 aa		13.58	□□□□□ -0.24
TSSC4-208	ENST00000467308	IL1RL1	Q01638	556 aa		13.58	□□□□□ -0.24
TSSC4-208	ENST00000467308	PTGES3	Q15185	160 aa	Known RBP	13.58	□□□□□ -0.24
TSSC4-208	ENST00000467308	OR7A5	Q15622	319 aa		13.58	□□□□□ -0.24
TSSC4-208	ENST00000467308	SLX4IP	Q5VYV7	408 aa		13.58	□□□□□ -0.24
TSSC4-208	ENST00000467308	TMEM225	Q6GV28	225 aa		13.58	□□□□□ -0.24
TSSC4-208	ENST00000467308	GPAT4	Q86UL3	456 aa		13.58	□□□□□ -0.24
TSSC4-208	ENST00000467308	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms