RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 TMEM53Q6P2H8 277 aa12.59□□□□□ -0.39
DNMT3A-208ENST00000466601 OR2T4Q8NH00 348 aa12.59□□□□□ -0.39
DNMT3A-208ENST00000466601 PLEKHA8Q96JA3 519 aa12.59□□□□□ -0.39
DNMT3A-208ENST00000466601 SLC38A2Q96QD8 506 aa12.59□□□□□ -0.39
DNMT3A-208ENST00000466601 SLC29A1Q99808 456 aa12.59□□□□□ -0.39
DNMT3A-208ENST00000466601 TMEM204Q9BSN7 226 aa12.59□□□□□ -0.39
DNMT3A-208ENST00000466601 GABARAPL3Q9BY60 117 aa12.59□□□□□ -0.39
DNMT3A-208ENST00000466601 RIBC2Q9H4K1 309 aa12.59□□□□□ -0.39
DNMT3A-208ENST00000466601 NOX3Q9HBY0 568 aa12.59□□□□□ -0.39
DNMT3A-208ENST00000466601 CCNB1IP1Q9NPC3 277 aa12.59□□□□□ -0.39
DNMT3A-208ENST00000466601 TVP23BQ9NYZ1 205 aa12.59□□□□□ -0.39
DNMT3A-208ENST00000466601 ORC6Q9Y5N6 252 aa12.59□□□□□ -0.39
DNMT3A-208ENST00000466601 HECTD1Q9ULT8 2610 aa12.58□□□□□ -0.39
DNMT3A-208ENST00000466601 ZAR1LA6NP61 321 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 ABCD4O14678 606 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 RAB36O95755 333 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 GPANK1O95872 356 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 PLAUP00749 431 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 CST2P09228 141 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 PYCR1P32322 319 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 IDH3GP51553 393 aaPredicted RBP12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 RAD23AP54725 363 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 HSF2Q03933 536 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 GLO1Q04760 184 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 ENDOGQ14249 297 aaKnown RBP12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 SNAPC1Q16533 368 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 SLX4IPQ5VYV7 408 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 UGT2A3Q6UWM9 527 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 CDC20BQ86Y33 519 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 PROKR2Q8NFJ6 384 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 OR9Q1Q8NGQ5 310 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 C11orf40Q8WZ69 217 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 OTULINQ96BN8 352 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 FBXO17Q96EF6 278 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 ZNF75AQ96N20 296 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 ZNF416Q9BWM5 594 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 NMNAT2Q9BZQ4 307 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 DCLRE1BQ9H816 532 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 EMC7Q9NPA0 242 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 RNF115Q9Y4L5 304 aa12.58□□□□□ -0.4
DNMT3A-208ENST00000466601 A0A1W2PPR1 153 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 FAM183AA6NL82 134 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 C12orf71A8MTZ7 269 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 PRR23D1E9PI22 279 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 H0YHG0 523 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 CELA3BP08861 270 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 MMP7P09237 267 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 CECR9P0C854 216 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 PRR23D2P0DMB1 279 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 GAAP10253 952 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 CLUP10909 449 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 ZNF32P17041 273 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 SPI1P17947 270 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 PAICSP22234 425 aaKnown RBP12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 KRTAP10-9P60411 292 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 PCBD1P61457 104 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 LSM6P62312 80 aaKnown RBP12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 RAB39AQ14964 217 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 TRIP10Q15642 601 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 KCNMB1Q16558 191 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 OTPQ5XKR4 325 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 C12orf73Q69YU5 71 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 ZNF704Q6ZNC4 412 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 PIAS4Q8N2W9 510 aaPredicted RBP12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 SLC26A10Q8NG04 563 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 ZNRF4Q8WWF5 429 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 PTP4A1Q93096 173 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 WACQ9BTA9 647 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 HCAR1Q9BXC0 346 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 PRRG3Q9BZD7 231 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 MED20Q9H944 212 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 FBXL3Q9UKT7 428 aa12.57□□□□□ -0.4
DNMT3A-208ENST00000466601 HLA-DQA2P01906 255 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 TFP02787 698 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 SERPINA5P05154 406 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 GYPBP06028 91 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 ZNF14P17017 642 aaPredicted RBP12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 NAAAQ02083 359 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 TEKQ02763 1124 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 PLP2Q04941 152 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 SPOCK1Q08629 439 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 MEP1BQ16820 701 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 LRRC36Q1X8D7 754 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 ZIK1Q3SY52 487 aaPredicted RBP12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 LPCAT4Q643R3 524 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 ADAM5Q6NVV9 412 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 PLBD1Q6P4A8 553 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 SLC22A25Q6T423 547 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 SYT9Q86SS6 491 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 MYPOPQ86VE0 399 aaPredicted RBP12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 CPOQ8IVL8 374 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 DEPDC4Q8N2C3 294 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 IL17RDQ8NFM7 739 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 OR10H5Q8NGA6 315 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 OR51L1Q8NGJ5 315 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 MS4A3Q96HJ5 214 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 RADILQ96JH8 1075 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 KCNS3Q9BQ31 491 aa12.56□□□□□ -0.4
DNMT3A-208ENST00000466601 PLEKHF2Q9H8W4 249 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms