RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 FAM162AQ96A26 154 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 TMEM186Q96B77 213 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 TSPAN32Q96QS1 320 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 ALG12Q9BV10 488 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 SAP30LQ9HAJ7 183 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 HIF1ANQ9NWT6 349 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 ARMCX1Q9P291 453 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 FBN1P35555 2871 aaKnown RBP14.99□□□□□ -0.01
COL7A1-206ENST00000466591 IGHV1-69-2A0A0G2JMI3 117 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 CLDN25C9JDP6 229 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 XKRYO14609 159 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 SLC22A2O15244 555 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 GMNNO75496 209 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 NCR1O76036 304 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 ZNF250P15622 560 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 ZNF81P51508 661 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 IFI44LQ53G44 452 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 ARMC4Q5T2S8 1044 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 AVPI1Q5T686 147 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 FAHD2BQ6P2I3 314 aaPredicted RBP14.99□□□□□ -0.01
COL7A1-206ENST00000466591 NRMQ8IXM6 262 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 TEX29Q8N6K0 151 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 ABHD4Q8TB40 342 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 GEMIN6Q8WXD5 167 aaKnown RBP14.99□□□□□ -0.01
COL7A1-206ENST00000466591 YIPF5Q969M3 257 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 RAB39BQ96DA2 213 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 FAHD2AQ96GK7 314 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 LRRC37BQ96QE4 947 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 EGLN1Q9GZT9 426 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 METTL17Q9H7H0 456 aaPredicted RBP14.99□□□□□ -0.01
COL7A1-206ENST00000466591 GRHPRQ9UBQ7 328 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 HIF3AQ9Y2N7 669 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 MALRD1Q5VYJ5 2156 aa14.99□□□□□ -0.01
COL7A1-206ENST00000466591 TRAV27A0A087WT01 109 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 ISPDA4D126 451 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 NPIPB13A6NJU9 1138 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 C12orf71A8MTZ7 269 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 NPIPB4C9JG80 1138 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 CXCR6O00574 342 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 SPRY3O43610 288 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 CCDC22O60826 627 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 GAAP10253 952 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 LAP3P28838 519 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 GUCY1A3Q02108 690 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 LIPEQ05469 1076 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 ZMAT1Q5H9K5 638 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 USP51Q70EK9 711 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 PEG10Q86TG7 708 aaKnown RBP14.98□□□□□ -0.01
COL7A1-206ENST00000466591 MEX3DQ86XN8 651 aaKnown RBP14.98□□□□□ -0.01
COL7A1-206ENST00000466591 RP9Q8TA86 221 aaKnown RBP14.98□□□□□ -0.01
COL7A1-206ENST00000466591 LIPHQ8WWY8 451 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 RAB1CQ92928 201 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 ELMOD3Q96FG2 381 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 ELOVL3Q9HB03 270 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 CYSLTR2Q9NS75 346 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 A4GNTQ9UNA3 340 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 FAM32AQ9Y421 112 aaKnown RBP14.98□□□□□ -0.01
COL7A1-206ENST00000466591 TIMM10BQ9Y5J6 103 aa14.98□□□□□ -0.01
COL7A1-206ENST00000466591 IGLV3-9A0A075B6K5 115 aa14.97□□□□□ -0.01
COL7A1-206ENST00000466591 NDUFAB1O14561 156 aa14.97□□□□□ -0.01
COL7A1-206ENST00000466591 MMP7P09237 267 aaPredicted RBP14.97□□□□□ -0.01
COL7A1-206ENST00000466591 SLC9A3P48764 834 aa14.97□□□□□ -0.01
COL7A1-206ENST00000466591 ANKDD1AQ495B1 522 aa14.97□□□□□ -0.01
COL7A1-206ENST00000466591 THSD4Q6ZMP0 1018 aa14.97□□□□□ -0.01
COL7A1-206ENST00000466591 VTCN1Q7Z7D3 282 aa14.97□□□□□ -0.01
COL7A1-206ENST00000466591 C1orf174Q8IYL3 243 aa14.97□□□□□ -0.01
COL7A1-206ENST00000466591 OFCC1Q8IZS5 231 aa14.97□□□□□ -0.01
COL7A1-206ENST00000466591 CCL17Q92583 94 aa14.97□□□□□ -0.01
COL7A1-206ENST00000466591 SEPHS2Q99611 448 aa14.97□□□□□ -0.01
COL7A1-206ENST00000466591 RERGLQ9H628 205 aa14.97□□□□□ -0.01
COL7A1-206ENST00000466591 KRCC1Q9NPI7 259 aaPredicted RBP14.97□□□□□ -0.01
COL7A1-206ENST00000466591 TRAV20A0A0B4J274 112 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 J3KTA2 159 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 TIMM8AO60220 97 aaPredicted RBP14.96□□□□□ -0.01
COL7A1-206ENST00000466591 SERPINA1P01009 418 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 IGHV3-13P01766 116 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 CST2P09228 141 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 MSR1P21757 451 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 GPR4P46093 362 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 NUDT2P50583 147 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 SLC7A2P52569 658 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 PPP1CBP62140 327 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 PSG4Q00888 419 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 SLC3A1Q07837 685 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 FAM27BQ5VT28 67 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 ACSM5Q6NUN0 579 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 ZNF771Q7L3S4 317 aaPredicted RBP14.96□□□□□ -0.01
COL7A1-206ENST00000466591 TREML1Q86YW5 311 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 OR13C2Q8NGS9 318 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 SLC25A40Q8TBP6 338 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 IPCEF1Q8WWN9 437 aaPredicted RBP14.96□□□□□ -0.01
COL7A1-206ENST00000466591 ACOT11Q8WXI4 607 aaPredicted RBP14.96□□□□□ -0.01
COL7A1-206ENST00000466591 ZNF570Q96NI8 536 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 GAL3ST1Q99999 423 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 HOPXQ9BPY8 73 aaPredicted RBP14.96□□□□□ -0.01
COL7A1-206ENST00000466591 KCTD14Q9BQ13 255 aaPredicted RBP14.96□□□□□ -0.01
COL7A1-206ENST00000466591 OR2H1Q9GZK4 316 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 ZNF665Q9H7R5 613 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 EFCAB1Q9HAE3 211 aa14.96□□□□□ -0.01
COL7A1-206ENST00000466591 NKIRAS2Q9NYR9 191 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms